Halocatena salina: MW046_00790 Help Entry MW046_00790       CDS       T08090                                  Name (GenBank) CDC48 family AAA ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism haad  Halocatena salina Pathway haad04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:haad00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     MW046_00790  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:haad03019]     MW046_00790    03009 Ribosome biogenesis [BR:haad03009]     MW046_00790    04131 Membrane trafficking [BR:haad04131]     MW046_00790   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:haad04147]     MW046_00790 Messenger RNA biogenesis [BR:haad03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      MW046_00790 Ribosome biogenesis [BR:haad03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     MW046_00790 Membrane trafficking [BR:haad04131]  SNARE   SNARE associated proteins    Others     MW046_00790  Autophagy   Aggrephagy    Other aggrephagy associated proteins     MW046_00790 Exosome [BR:haad04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    MW046_00790 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N RuvB_N CDC48_2 AAA_16 AAA_2 TIP49 AAA_22 AAA_5 AAA_14 AAA_33 NPHP3_N nSTAND3 RNA_helicase AAA_28 AAA_7 IstB_IS21 Mg_chelatase Parvo_NS1 AAA_3 AAA_18 ABC_tran DUF815 ATPase Sigma54_activat TsaE AAA_24 AAA_11 AAA_17 NB-ARC AAA_19 AAA_30 AAA_lid_PRS2_C NACHT SLFN-g3_helicase PhoH bpMoxR Sigma54_activ_2 Bac_DnaA Vps4_C ATP-synt_ab Zot Motif Other DBs NCBI-ProteinID:  UPM43004 UniProt:  A0A8U0A1P8 LinkDB All DBs Position complement(166992..169253) Genome browser AA seq 753 aa AA seqDB search MKLTVKFLKQKDAGRGLAAIDREAMSELDLENGDYIVISAGDGRAVARVWPGYPEDQGQG IIRIDGRLRQEIGVGIDDSVTVEKADVKPAKSITVALPQTLRIQGDVGSLIRDQLSGHAV TTGQTVPISFGLGPLSSMSGQSIPLKIADTSPSGTVVITDSTEMHVSEKPAEQIVSEEPS DRETPNVTYEDIGGLDEELEQVREMIELPMRHPELFRQLGIDPPKGVLLHGPPGTGKTLM AKAVANEIDAYFTNISGPEIMSKFYGESEEQLREIFEEASDNAPAIVFIDELDAIAPKRG ETTGDVERRVVAQLLSLMDGLEERGQVTVIGATNRVDALDPALRRGGRFDREIEVGVPDQ EGRKEILQVHTRGMPLTDNVDLDVYAENTHGFVGADLESLAKEGAMTALRRIRPQLDLES DEIDSEMLEDLRVMDDDFREALKGIEPSALREVFVEVPDVTWDSVGGLENTKDRLRETIQ WPIDYPEVFRTMDMASAKGVLLYGPPGTGKTLLAKAIANEANSNFISIKGPELLNKYVGE SEKGVRDVFSKARENAPTVVFFDEIDSIAGERGQRMSDSGVGERVVSQLLTELDGVEELD DVVVIAATNRPDLIDSALLRPGRLDRHVHVPVPDEEARRAIFEVHTRDKPLADAVDLERL ARMSDGYVGADIEAVCREAAMIATREFIGRVDAEEIETSVGNVRITMDHFEQALEEVSPS VTDEVREQYDEIEDQFGRASEPTDREKISRTFQ NT seq 2262 nt NT seq  +upstreamnt  +downstreamnt atgaaactcacagttaaattcctcaaacaaaaagacgcagggcgaggactcgcagcgatc gaccgcgaagcgatgtccgaactcgatctcgaaaacggggattacatcgtgatcagcgca ggtgatggccgtgccgtcgcccgcgtctggccgggctacccggaggatcagggccagggg atcatccggatcgacggtcgcctccgacaggagatcggcgtcgggatcgatgacagcgtc accgttgagaaggcggacgtcaagcccgcaaaaagcatcacagtggcgctgccccaaacc cttcgaattcagggtgatgtcgggtcattgattcgagatcagctgagtggccacgcggtg acgaccgggcaaaccgttccgatctcgttcggtctgggaccattatccagcatgtccgga cagagcatcccactgaagattgcagacaccagcccgagcgggacggtggtgatcaccgat tcgacggagatgcatgtgagcgagaaacccgccgaacagatcgtttccgaggaaccaagc gatcgggaaacacccaatgtcacctacgaggacatcggcggactggacgaggagctagag caggtccgagagatgatcgagctgccgatgcgccatccggagctgttccggcagttgggg atcgacccgccaaagggagtgctgttacacggtccacccggaaccggaaagacgctgatg gccaaggcggtggccaacgagatcgacgcgtacttcaccaacatctccggcccggagatc atgtcgaagttctacggcgagtccgaagaacagctccgagagatcttcgaggaggcctcg gacaacgcacccgcgatcgtattcatcgacgaactcgacgccatcgcgccaaaacgtggt gagacgactggtgacgtcgagcgccgcgtcgtcgcccagcttctctcgctgatggatggg cttgaagagcgcggacaagtgactgtcatcggagcaaccaaccgcgtcgatgcgctcgat cccgcgcttcgccgtggtggtcgattcgatcgagagatcgaggtcggggtgcccgaccaa gagggacgcaaagagatacttcaggtccacacccggggaatgcccctcaccgacaacgta gatctcgacgtgtacgccgaaaacacccacggattcgtcggggcggatctcgaatcactc gccaaagaaggagccatgaccgcgttgcgacggattcgcccccagctggatctcgaaagc gacgagatcgacagcgagatgctcgaagacttgcgtgtgatggacgacgatttccgggaa gcgctcaagggcatcgaaccgtccgcgctccgggaggtgttcgtggaagtcccagacgtc acgtgggacagcgtcggtggactcgaaaacaccaaagatcggctccgggagacgatccag tggccgatcgactaccccgaggtgttccggacgatggacatggcttcggccaagggggtt ctcctgtacggcccaccgggaacagggaaaacgttgctcgcaaaagccatcgccaacgag gccaacagcaacttcatctcgatcaagggaccggagctgttgaacaagtacgtcggtgaa tccgagaaaggggtccgagacgttttctcgaaggcccgagagaacgcaccaaccgtagtg ttcttcgatgagatcgattcgatcgcaggcgaacgcgggcagcgcatgagcgactccggt gtcggtgagcgcgtcgtctcacaactgctgacggaacttgacggcgtcgaggaactcgat gacgtcgtcgtcatcgccgcgaccaaccgaccggatctcatcgacagcgccctgcttcgt cccggacgtctcgaccggcacgttcacgtgccagttcctgacgaggaagcccggcgggcg atcttcgaggtccacacccgcgacaagccactcgctgatgctgtcgatctcgaacggtta gcacggatgtctgatggctacgtcggagcggacatcgaggccgtctgtcgggaagccgcg atgatcgctacccgcgagttcatcggccgtgtcgatgctgaagagatcgaaacatcggtc ggaaacgtccgcatcacgatggatcacttcgagcaggcgcttgaggaagtcagcccgagc gtcaccgatgaggttcgcgaacagtacgacgagatcgaagatcagttcggacgcgccagc gaaccgaccgacagagaaaagatcagccgaacgttccagtga

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