KEGG   Halocatena salina: MW046_01625
Entry
MW046_01625       CDS       T08090                                 
Name
(GenBank) transcription initiation factor IIB family protein
  KO
K03124  transcription initiation factor TFIIB
Organism
haad  Halocatena salina
Pathway
haad03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:haad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MW046_01625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haad03021]
    MW046_01625
Transcription machinery [BR:haad03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     MW046_01625
 Prokaryotic type
  Archaeal type
    TFB
     MW046_01625
SSDB
Motif
Pfam: TFIIB Sigma70_r4 HTH_24 HTH_28 Zn_Ribbon_TF HTH_20 ORC6_2nd zf-CCHC_4
Other DBs
NCBI-ProteinID: UPM43160
UniProt: A0A8U0A1Y7
LinkDB
Position
313199..313930
AA seq 243 aa
MDQTYEQFEAVCNKCGYVVHDASDVTNQPEKAIADLTETPETLSPSWLNYCTVQNATEDR
LARGIDVLDGIGDSLEIGVDVRFRGAELYGESIREKLTDGRDADVIVTAALYCAAKEHGV
PLPSVVLIDTAGINSRTFYRVVRVLDDSLDLALPTPVPSDYLPYFSSTLGLSERQEHESQ
RLLNEISTKYATSGKNPVGFVAAIVYTILAGERTQSEISDAAGISQETLRVRIAECREVG
ILE
NT seq 732 nt   +upstreamnt  +downstreamnt
atggatcagacgtacgaacagttcgaggccgtctgtaacaagtgtggctacgtcgtacac
gacgcctctgatgtgacgaaccagccggagaaagcgattgcagacctaacggaaacgcca
gaaacgctctccccttcgtggctcaattactgcacagtccagaatgcaaccgaagaccga
ttggcccgcgggatcgacgtattggatgggatcggcgacagtctagagatcggtgtcgac
gttcgatttcgaggtgccgagctatacggtgaatctattcgagagaagcttacagatggt
cgagatgctgatgtgatcgtaacagccgccctctactgcgccgcgaaagagcacggtgtg
ccactaccatcggtagtactcatcgatacggccgggatcaactcgcgaacgttctatcga
gtagtacgcgtactggatgactcgctcgatcttgctctcccgacgcccgtacctagtgat
tacctgccctacttcagttcgacgttgggactcagtgaacgacaagagcacgaaagccag
cggctactaaacgagatcagtacaaaatacgctacgtcggggaagaatccagttggattc
gtggcggcaatagtgtatacgattctcgctggcgagcgaacacagagcgagatcagtgat
gcagcgggcatttctcaggaaacgctgcgcgtcaggatcgcggagtgcagagaggtgggg
atccttgagtga

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