Halocatena salina: MW046_03075
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Entry
MW046_03075 CDS
T08090
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haad
Halocatena salina
Pathway
haad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MW046_03075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haad03021
]
MW046_03075
Transcription machinery [BR:
haad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MW046_03075
Prokaryotic type
Archaeal type
TFB
MW046_03075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
RB_B
HTH_3
TFIIB_C_1
Motif
Other DBs
NCBI-ProteinID:
UPM43437
UniProt:
A0A8U0A688
LinkDB
All DBs
Position
complement(606060..606926)
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AA seq
288 aa
AA seq
DB search
MHSTAIPSCPECDSRVRHDGTESVCEQCGLVLGEDPIDHGPEWRSFDDDDTNPVRTGAPL
TRSRHDRGLSTEIGYSSRVKGRKRRQLARMRRQHSRAQISTKAERNQVYAFTEIRRLTSA
LSLPTSIRDRACVLFDSAQNANLLRGRSIEGFTAAVIYATCRADSVSRTLEEITATARAS
EAELKAAYRALNRELGLPTGPIDPTEYLPRFACELDLPQSIERRARELVTEAHERGLIAG
RNPGGIAAACLYTAAEEASYGLTQDDAAAVAGVTPVTLRSTYYDLTDV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcattccacagcaatcccatcatgtccagaatgtgatagtcgtgtgagacacgatgga
accgaaagcgtttgtgaacagtgtggtctggtacttggtgaggatccgatcgatcacggt
ccggagtggcgctcgttcgatgacgacgacacgaatcctgttcgaacgggggcacccctc
actcgatcgcgccacgatcggggtttatcgaccgagatcggctactcatcgcgggtgaaa
ggacgaaaacggcgtcagctcgctcggatgcgccgccagcacagtcgggcccagatctcg
acgaaggccgagcgcaaccaagtgtacgcctttaccgagattagacgtctcacgagcgcg
ctgtctctaccgacgtcgattcgagatcgtgcatgtgtgctgttcgattcagcccagaac
gcgaatctgcttcggggtcgatcgatcgaagggttcacagcagcagtcatttacgccacg
tgccgggcggattcggtgtcacgaacgcttgaggagatcacagcgacggcccgtgcatcg
gaagccgaattgaaagcggcttatcgcgctctcaaccgcgaactcggattgccgacggga
cccatcgatcctacggagtatctcccacggtttgcgtgtgagcttgatctcccccagtcc
atcgaacgccgtgctcgggaactggtcacggaagcccacgaacgaggcctgatagccggc
cgaaatccgggagggatcgccgctgcttgtctgtacactgctgccgaggaagcgtcgtat
ggtctcactcaagatgacgctgctgccgttgccggagtgacgcctgtgaccctccggtcg
acgtactacgatctcaccgacgtctga
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