Halocatena salina: MW046_03585
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Entry
MW046_03585 CDS
T08090
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
haad
Halocatena salina
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haad03009
]
MW046_03585
Ribosome biogenesis [BR:
haad03009
]
Prokaryotic type
ribosomal protein modification factors
MW046_03585
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
UPM43535
UniProt:
A0A8U0A2X7
LinkDB
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Position
710420..712120
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AA seq
566 aa
AA seq
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MSVTVVGSGPAVDAIEAAVSDIDHELSVRSRVETLADDLAVVVGVVGSDVFSIANEEARS
NGTPWIAVELGGIGGCSHPSVDVAVSGYGVSTACFDCLRTRVRSGLDDSEADSSDIDPET
ARFGGALAGRETVKTVSGSSSLFGRVIEVPHARRRIYSVPGCSCTGHREWTLSRAHEERS
LQATLERAERAVDDRIGLINEVGEAESFPVPYYLAQLADTTGFSDAQASQQAAGVALGWD
EAFMKALGEGLERYCAGVYDSDALYTARAGNLSAPIQPSTFVRPDDPDDTAPIEWVPGED
LHTGETVSLPAARVLFPYEGPGPTITTGLGLGSSGAAALIAGVTEIIERDGALLAWYSTY
EPLELSIDDEEYETLVARARAEGLSVTASLLTQDVDIPVIGVAVHRDEEWPAFALGLAAD
LDPIAAARSACTEALQNWTELRRMGKTGSRNAGGRIGHFASRPPATEEFTNPKQTIPAAS
IAADGPTGADALDLLLERLSDVGLDAYAARLTTPDVEALGFEAVRVLVPRAQPLFIGESY
FSERARTVPSELGFEPRLQREHHPYP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcactgtcgtcggctccgggcctgcggtagatgccattgaggcggccgtttcc
gacattgatcacgagttatccgttcgatcaagggtcgagacgcttgcggacgatctcgct
gtcgtcgtgggagtagtcggatcggacgtgttctcgatcgcaaacgaggaggcacgatcg
aacggaacaccgtggattgccgtcgaactcggcggtatcgggggatgttcccatccatcg
gtcgacgttgccgtatcgggctatggggtttccaccgcgtgtttcgattgtcttcgaacg
cgcgttcgatccggactcgacgactcagaggctgattcttccgatattgacccagaaacg
gcacgctttggtggtgctctagccggacgggagaccgtcaagacggtgtccggatcgtcg
tcgctgttcggtcgcgtgatcgaggtgccacacgcacggcgacggatctactccgttccg
ggctgttcgtgtacgggacaccgagagtggacgctgtcgagagcgcacgaggaacgatcg
ttacaggcgacgctcgaacgagccgagcgagcggtcgacgatcggatcggactgatcaac
gaggtgggtgaggccgagtcgttcccggtgccgtactacctcgcacagctcgccgacact
accgggttcagcgacgcgcaagcgagccaacaggctgccggtgtcgcactaggatgggac
gaggcgttcatgaaagcgctcggtgagggactcgaacgctactgtgctggcgtgtacgat
tccgatgccctctacaccgcacgcgcggggaatctctcggcaccgattcagccatcgacg
ttcgttcgtcccgatgatccggatgacaccgctccgatagagtgggtgcccggtgaagat
ctacacaccggtgagacggtgtctcttcctgccgcccgggtgttgttcccctatgaagga
ccgggaccgaccatcacgacgggacttggactcggaagttcgggcgcggcggcgttgatc
gctggggtaacggagatcatcgaacgggacggtgcgctgttggcgtggtactcgacgtac
gaacccctggagctgtcgattgacgatgaggagtacgagacactcgtcgcccgagcaaga
gcggaagggctgtcggtgaccgcgtcgctgttgacccaagatgtcgatatcccagtgatc
ggcgtggccgtccaccgagatgaggagtggccggcgttcgctctcggtctggcagccgat
ctcgatccgatcgctgccgctcgatcggcgtgtaccgaagcgcttcaaaactggacggag
cttcgtcggatgggtaaaaccggttcccgaaatgctggcggccggatcggtcatttcgca
tcacgcccacccgcgacagaggagttcactaaccccaagcagacgattccagcagcgagc
atcgcggcggacggtcccacgggagcagatgcgctagatctgctcctcgaacggctcagt
gatgtcggactcgacgcttatgccgcccgactgacgacgccggacgtggaggcgctcggt
ttcgaggccgtccgtgtgctcgtgccacgagcacaaccactgttcatcggtgagtcgtac
ttcagcgagcgggcgcggacggttccctcagagctgggcttcgaaccacgactccagcgc
gaacaccatccgtatccgtag
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