Halocatena salina: MW046_03800
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Entry
MW046_03800 CDS
T08090
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haad
Halocatena salina
Pathway
haad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MW046_03800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haad03021
]
MW046_03800
Transcription machinery [BR:
haad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MW046_03800
Prokaryotic type
Archaeal type
TFB
MW046_03800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
BRF2-like_C_cyclin_rpt
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
UPM43577
UniProt:
A0A8U0A6M2
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All DBs
Position
complement(752240..753208)
Genome browser
AA seq
322 aa
AA seq
DB search
MSHTTTKRRRNRPSRIEQEETDADEQAAVCPECGAEDAVQQQGERCCRNCGLVLEEQLID
RGPEWRAFDSQERDRKSRVGAPTTNTMHDKGLTTDISWKNKDAYGQSLSPKKRSQINRLR
KWHDRIRTVDNGERNLRLALSEIDRMASALGVPKSVREVASVMYRRALDEDLIRGRSIEG
VATSTLYAACRQEGIPRSLDEVTEVARIERREIARTYRYVSQNLGLELKPADPKQYVPRF
CSDLALSEEVQTKANDIIDITAEAGLLSGKSPTGYAAAAIYAASLLCNDKRTQRDIADVA
QVTEVTIRNRYQEQIEELDIVA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatacgacaaccaaacgccgtcgaaaccgaccgagccgcatcgagcaagaggag
accgacgccgacgagcaagcagctgtctgtccggaatgcggcgccgaagatgctgttcaa
cagcagggtgaacggtgctgtcgcaactgcggcctcgttctcgaagaacagttgatcgat
cgcgggccggaatggcgtgcgttcgacagtcaggaacgagatcgcaagtcccgcgtcggt
gcaccgacgaccaacacgatgcacgacaagggactgacgaccgatatcagttggaagaat
aaagacgcctacggacagtccctctccccgaaaaaacgttctcagatcaaccggctacga
aagtggcatgaccgcattcgcactgtagacaacggtgagcgcaatcttcggctcgcgctt
tcggagatcgatcgtatggccagcgcgctcggcgttccgaaatccgttcgagaggtcgca
tcggtcatgtaccggcgtgcactcgatgaagacctcatccgtggccggtcgatcgagggc
gtcgctacttctacgctgtacgccgcctgccgccaggaagggattccgcggagtttggat
gaggtgacggaagtggcccggatcgaacgccgcgagatcgcacgcacgtaccgctacgtc
tctcaaaacctcggacttgagctgaaacccgctgacccgaagcagtacgtcccccgattc
tgctcggatctcgctctctccgaagaggtacagacgaaagccaacgacatcatcgacatc
acggccgaagcgggcctcctttcggggaaatcaccgacgggatacgctgctgcagcgatt
tatgccgcctctctgctctgcaacgacaaacgaacccaacgggacatcgccgacgtcgca
caggtgactgaggtcacgatccgcaaccgctaccaagagcagatcgaagagttggatatc
gtcgcataa
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