Halocatena salina: MW046_05730
Help
Entry
MW046_05730 CDS
T08090
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
haad
Halocatena salina
Pathway
haad03030
DNA replication
haad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MW046_05730 (fen)
03410 Base excision repair
MW046_05730 (fen)
03450 Non-homologous end-joining
MW046_05730 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haad03032
]
MW046_05730 (fen)
03400 DNA repair and recombination proteins [BR:
haad03400
]
MW046_05730 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haad04147
]
MW046_05730 (fen)
DNA replication proteins [BR:
haad03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
MW046_05730 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
MW046_05730 (fen)
DNA repair and recombination proteins [BR:
haad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
MW046_05730 (fen)
Exosome [BR:
haad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MW046_05730 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
5_3_exonuc_N
MctB
OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
UPM43941
UniProt:
A0A8U0A411
LinkDB
All DBs
Position
complement(1125807..1126781)
Genome browser
AA seq
324 aa
AA seq
DB search
MGNAALRELAVIEEVSFDALSGVVAVDAHNWLYRYLTTTVRFTNEDAYTTEDGTEVANLI
GIVQGLPKFFEHDLTPVFVFDGGVTDLKSDEIEQRREQRERYEEQLETAREEADAAVVSR
LESRTQRLTDVIHETTRELLTHLDVPIVEAPAEGEAQAAHMARTGAVEFVGSEDYDALLL
GAPFTLRQLTSSGDPERMDFEATLEKHNLTWEQLVDIAILCGTDFNDGVDGIGPKTAVQL
VHEHGDLWGVLEAQGAYVEHAEVLRELFLNPDVTDEYTLDTDLSPDIDAAREYVDDWGVP
DSTVENGFERIEDSVAQTGLDDWM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacgccgcactccgggagcttgcagtcattgaagaggtgtcgttcgatgcgctc
agtggcgtcgtcgcagtggacgcccacaactggctctaccggtatctcacgacgaccgtc
agattcacgaacgaggacgcgtacacaaccgaggacggaacagaggtcgcaaacctcatc
gggatcgtccaagggctaccgaagttcttcgaacacgatctgacgccggtgttcgtcttc
gacggcggtgtcactgatctcaaaagcgacgagatcgaacagcgccgagaacagcgcgaa
cgctacgaagaacagctcgaaactgcgcgtgaggaggcggatgcagcggtcgtctcccga
ctcgaatcgcgcactcaacgcctgacggacgtgatccacgaaacgacccgggagctactg
acccacctcgacgtaccgatcgtcgaagccccagcagagggtgaagcacaggcggcgcac
atggctcgtaccggagcggtggagttcgtcggcagcgaggactacgatgctctgttgttg
ggtgcaccgttcactctacggcagttgacgagctcgggcgacccagagcggatggatttc
gaggcgacgttggaaaaacataatctcacgtgggagcaactcgtggacatcgccatcctc
tgtggaacggatttcaatgacggcgtcgacggcatcggaccgaagacggcagtacagctg
gttcacgagcatggcgatctctggggggtactcgaagcacaaggggcgtacgtcgaacac
gccgaagttctccgagagctgtttctgaatcccgacgtgaccgacgagtacactctcgat
acggatctatcccccgacatcgacgctgctcgggagtacgtcgacgactggggagtcccc
gacagcaccgtcgaaaacggattcgaacgcatcgaggactccgtcgcccaaaccgggctt
gacgactggatgtaa
DBGET
integrated database retrieval system