Halocatena salina: MW046_06090
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Entry
MW046_06090 CDS
T08090
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
haad
Halocatena salina
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haad03016
]
MW046_06090 (truD)
Enzymes [BR:
haad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MW046_06090 (truD)
Transfer RNA biogenesis [BR:
haad03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MW046_06090 (truD)
Prokaryotic type
MW046_06090 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UPM44010
UniProt:
A0A8U0A475
LinkDB
All DBs
Position
complement(1187385..1188737)
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AA seq
450 aa
AA seq
DB search
MYRSQPAERSIGIETYVSDADGIGGRLRDHISDFRVREREAVDLQPVDADIGSYPVLVFR
ATLRNRDTNGFVDDLASQLGISRERVTWAGTKDKRAITTQLFSIRDFEQNTLPSVSGGEI
EIVGRMGRPVLYGDHRGNDFEIVVRGVHPNAATRTATITTALQQFGGERTDNGSETTVGV
PNFFGPQRFGTIRPVTHEVGLAIVRGNWEQAVMAYLGNPSEDEPAETRAAREYVERTHDW
DGAVERFPSYLRHERAIAHRLIETDATDPDRFRKALTAVPTNLQTLFVHAAQSYLFNRML
SQRFERGLPFDRPIAGDVVCFLDDQDRPDPDRCQRVTDSRTETIARHCDRGRAFVTAPLV
GSDTELSDGEQGEIEREVLDAVDLTPGAFELPGAFDSTGTRRPILLRTDLSIDTEATDEK
AVAFAFSLPNGAYATVLLREYMKVPPSAME
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggtcacagccagccgaacggtcgatcggaatcgaaacgtacgtgagcgatgcg
gatgggatcggtggccgtctccgggatcacatatccgatttccgggttcgtgagcgcgag
gcggttgatctccagccagtggacgccgacatcggctcgtaccctgttctcgtcttccgt
gcgacactcagaaaccgggatacgaacgggttcgtagacgacctcgccagtcaactgggt
atcagccgcgagcgggtcacgtgggcgggaacgaaagacaaacgcgcgatcactacacag
ctgttttcgatacgcgacttcgagcagaacaccctaccgtcggtgtccggcggggaaata
gagatcgttggtcgcatgggtcgcccggtgttgtacggcgatcaccggggaaacgacttc
gagatcgtcgtccggggagtacacccgaatgccgccacccggaccgccacgatcacgaca
gccctccaacagttcggtggtgagcggacggacaacggaagtgagacaacggtgggcgtg
ccgaacttcttcggaccacagcgcttcggaacgatacgcccagttacccacgaggtcggg
cttgccatcgttcgtggcaactgggagcaagccgtgatggcgtatctgggaaacccttcc
gaggacgaaccggccgagacgcgagccgcacgtgagtacgtcgagcggacccacgattgg
gacggcgcagttgagcggtttccgtcgtatctccgccacgagcgggcgatcgctcaccgg
ctcatcgaaacggacgcgactgacccggatcgcttccgaaaggcactgacggccgtcccg
acgaacctacagaccctgttcgttcacgcggcccagtcgtacttgttcaaccgaatgctc
tcacagcgcttcgaacgtggcttgccgttcgatcggccgatcgcgggagacgtggtctgt
ttccttgacgatcaggaccgtcccgatcccgatcggtgccagcgggtaaccgactcccga
accgagacgatcgcacgacactgtgaccggggtcgggcgttcgtcactgccccacttgtc
ggaagcgacacggaactgagtgacggcgagcaaggtgagatcgaacgcgaggtactcgat
gcggtggatcttacacccggtgcgttcgagttgcccggtgcgttcgactccaccgggacc
cgacgcccgattctcctccggacggatctctctatcgacacggaagcgacggacgagaag
gcagttgcgttcgcgttttccctcccaaacggggcgtacgcaacggtgctcctccgcgag
tacatgaaggttccaccgagcgcgatggagtga
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