Halocatena salina: MW046_06335
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Entry
MW046_06335 CDS
T08090
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
haad
Halocatena salina
Pathway
haad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MW046_06335 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haad03021
]
MW046_06335 (rpoB)
Enzymes [BR:
haad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MW046_06335 (rpoB)
Transcription machinery [BR:
haad03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MW046_06335 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
UPM44056
UniProt:
A0A8U0A5C5
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All DBs
Position
1233691..1235517
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AA seq
608 aa
AA seq
DB search
MSQGQNAKVYVNGSLVGTHPEPEQLASDIREARRRGDVSEMVNVAVKERTSEVIVNADAG
RARRPLIVVENGEPRVDDEDIEAIRNGNLEFEDLIASGAVEFIDAEEEEDIYVAVDESDL
TEDHTHLEIDPQLMFGIGAGMIPYPEHNASPRITMGSGMIKQSLGLPSANYRIRPDTRQH
LLHYPQLSMVSTQTTEQIGYDDRPAAQNFVVAVMSYEGFNIEDALVLNKGSVDRALARSH
FFRTYEGEERRYPGGQEDHFEIPDDEVRGARGEESYNHLDEDGLVNPETDVDENDVLLGK
TSPPRFLEEPDDMGGLGRQKRRETSVTMRSGENGVVDTVTLMEGEDGSKLSKVSVRDERI
PELGDKFASRHGQKGVIGHIAPQEDMPFTQDGVVPDLILNPHALPSRMTVGHILEMLGGK
VGALEGRRVDGTPFQGEGEESLRSALEDHGFKSSGKEIMYSGVTGEKIDAEIFVGVIFYQ
KLYHMVSNKIHARSRGPVQVLTRQPTEGRAREGGLRVGEMERDVLIGHGAAMALKERLLD
ESDREQVYVSADTGMVAVNDVNQRRVYDPLTGDESDIHEVEISYAFKLLLDEMMALGIRP
RLNLEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagggacaaaacgcgaaagtctacgttaacggtagtttggtcggaacgcatccc
gaacccgagcagcttgcgagcgacattcgagaagcacgccggcgcggggacgtcagcgag
atggtgaacgtcgcggtcaaagaacgcaccagtgaggtcatcgtcaacgctgatgcagga
cgcgcacggcggccgctcatcgtcgtcgagaacggcgagccgcgggtagacgacgaggac
atcgaggcgatcagaaacgggaatctcgaattcgaagatctcatcgccagcggtgcagtc
gagttcatcgacgctgaagaagaagaggacatctacgtcgcggtcgatgagtcggatctc
accgaggaccacactcacctcgaaatcgatccacaactcatgttcgggatcggtgcaggg
atgatcccctaccccgaacacaacgcctcaccgcgtatcacgatgggatcggggatgatc
aaacagtcgctggggcttccatcagcgaactaccggattcggccggatacgcgccaacac
ctgttgcattaccctcagctatcgatggtctctacccagaccacagaacagatcggatac
gacgatcgtccggctgcccagaacttcgtcgtcgccgtgatgtcctatgaggggttcaac
atcgaggacgcgctcgtgttgaacaaggggagcgtcgatcgcgccctcgcgcggtcgcac
ttcttccggacgtacgagggagaagaacgccggtaccccggtgggcaggaagaccacttc
gagatccccgacgacgaggttcgtggcgcacgcggcgaggaatcgtacaaccacctcgac
gaggacggtctcgtcaatcccgaaaccgacgtagacgaaaacgacgtgctgttgggtaaa
accagcccacctcgctttcttgaagagccagacgacatgggcgggctgggacgacagaaa
cgccgcgaaacaagcgtaacgatgcgctcgggggagaacggtgtggtcgacacggtcacg
ctcatggagggtgaggacggttcgaagctctcgaaagtgagcgtccgcgacgagcggatt
cccgaacttggcgataagttcgcgtcccggcacggccaaaaaggcgttatcggacacatc
gccccccaagaagacatgccgttcacccaggacggcgtcgttccggatctgattctcaat
ccccatgcgcttccgtcacggatgaccgtcggccacatcttagagatgctcggtggaaag
gtcggcgcgctcgaaggccgacgggtcgacggaacaccgttccaaggcgaaggcgaggaa
tcgctgcgttcggcactcgaagaccacggcttcaaatccagcggcaaggagatcatgtac
tcgggcgtgaccggtgagaagatcgacgcggagatcttcgtcggtgtcatcttctaccag
aagctctatcacatggtctcgaacaagattcacgcccgctcgcgggggcctgtgcaggtg
cttacccgccaaccgacagaaggacgtgctcgggaaggtggtctccgcgtcggcgaaatg
gaacgcgacgtgctcatcgggcacggcgcggcgatggcgctcaaagaacgcttgttggat
gaatccgatcgagaacaggtgtacgtgagcgcagacaccggaatggtcgccgtcaacgac
gtcaaccaacgacgagtgtacgatccgctcaccggtgacgaaagcgacatccacgaggtg
gagatcagctacgcgttcaaactcctgctggacgaaatgatggcgctcggcatccgacca
cgactcaacctggaggacgcagtataa
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