Halocatena salina: MW046_07140
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Entry
MW046_07140 CDS
T08090
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
haad
Halocatena salina
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haad03036
]
MW046_07140 (smc)
Chromosome and associated proteins [BR:
haad03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
MW046_07140 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
CCDC39
AAA_21
FKBP15
AAA_13
AAA_29
DUF1664
ATG16
GAS
HAUS1
FapA
Laminin_I
CC_Bre1
DUF724
CCDC113_CCDC96_CC
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
UPM41767
UniProt:
A0A8U0A1A4
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All DBs
Position
1388164..1391742
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AA seq
1192 aa
AA seq
DB search
MHIKELVLDDFKSFGRKTRIPFYEDFTTISGPNGSGKSNIIDSILFALGLARTSGIRAEK
LTDLIYNPDDTDEAPSGTREASVEVILDNSSGVVSRSQIVNAAGTDNIGDTDEITVKRRI
KQTEDNYYSYYYLNDRSVNLSDIQDLLAQVGVAPEGYNVVMQGDVTEIINMSAGDRRRII
DEIAGVAEFDARKEDAAEELEVVRERLEEADLRIEEKRERLDQLEDEREIALEYQTLKEE
KAEYEGYLTAAELEEKRDRLQRTKETIADTEATLTERQTTRSKREETVTQLEADVSELNA
EIERTGEDEQLRVKQEIEEIKGEIARKENAIETATERAKEAERKRSQAFVKLDGKQETVE
ELSGQIKTQKVEKASIKAEIQDHESELASVETEIEAVDTEYERLKTELADARDRLETAKS
ERNDSQREQDRLLDAARRRSNERRELEEEIESLEETIPELKAKRTDTETELEAAKENKAT
IQSAVNDLRDEKYELQSELDEIEDELNATQQEYAELEANTDDGTNTSYGRAVSTVLNSGI
DGVHGTVSQLGSISGRYAVACETAAGGRLAHVVVEDDGVGQRCIEHLQSRNAGRATFLPI
SEMQRRSLPSLPGHAGVVDFAYNLVEFDRQYAGVFAYVLGDTLVVEDIDTGRELMGEFRM
ATLGGDLIEKSGAMTGGSNNGTRYSFSSDTSRLEQVAERITELEDRRRSLREDLRSVESR
LDDARERQSAATDQVRDIRAERTEIDERIESTKKAIEEKETEITEIERAREETDEQMAAI
EDEITEKDETIAAIEDEITDLEAELRSSAVAELTDRAETLRETIADLEDDMRKIDEDLNE
LKLEREYAEETIDDLEDEIETAKERNAAAIERIEELEAEIEDENARLERKHEQVAELEEE
LADLKAERTELKTELQEARESYETANDAVDRAESRLESLRERETRLQEEIEELSEQVGSY
DPDAIPSHETLEREIDRLQEEMVALEPVNMLAIEEYDRVSEELTDLETRRETLTEERDAI
QTRIEEFETRKRSTFMDAYEGINEQFEGIFARLSDGSGTLFLEDEEDPFAGGLTMKAQPG
DKPVQRLAAMSGGEKSLTALAFIFAIQRYNPAPFYALDEVDAFLDAANADAVGELIDELA
GDAQFVVVSHRSALLERSERAIGVTMQGNNISAVTGIHLSDSDADSEVPADD
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaaagaactcgttttggacgatttcaagagctttggtcgaaagacgcggatc
cctttctatgaggatttcaccacgatcagcggtccgaacgggtctggaaaatcgaacatc
atcgattcgattctgtttgcactcgggcttgcgcgtacctcgggtatccgcgcggagaaa
ctcacagatctcatttacaaccccgacgacaccgacgaagctccatccggcacgcgtgag
gcgagtgtcgaagtgattctcgacaacagctcgggggtagtgtcgcgctcacagattgtc
aacgcggctggcacggacaacatcggtgataccgacgagatcaccgtcaaacgacggatc
aaacagaccgaagataactactattcgtactactatctcaacgatcggtcagtgaacctt
tcggatatccaggacctgctagcgcaggtcggagtcgctccggaagggtacaacgtggtg
atgcagggcgacgtgaccgagatcatcaatatgtcggcgggcgatcgtcgccggatcatc
gacgagatcgcgggtgtggcggagttcgacgctcgcaaagaggacgccgctgaggagctg
gaggtggttcgagaacgactcgaagaggccgatctccgaattgaggagaaacgcgagcga
ctggatcagttggaagacgaacgggagatcgcgctcgaatatcagacgctcaaagaggag
aaagccgagtatgaggggtatctcacggccgcagagctcgaagaaaaacgcgaccgcctc
caacggaccaaagagacgatcgccgacacggaggcaacgctcaccgaacgtcaaacgaca
cgttcgaaacgggaagagacggttacccaactggaagccgacgtatcggagctgaacgcc
gagatcgagcgaactggtgaggacgaacagctgcgcgtcaaacaggagatcgaggagatc
aaaggcgagatcgcccgcaaggagaacgccatcgaaaccgccaccgaacgcgcaaaagag
gcagaacgaaagcgaagtcaagcgttcgtgaagctcgatgggaaacaggaaacagtcgag
gagctgtctggccagatcaagactcaaaaggtcgaaaaggcgtcgatcaaagccgagatc
caagaccacgagtcagaactggcaagcgtcgaaacagagatcgaagcggtcgacacggag
tacgaacggttgaaaacggaactggctgacgcgcgcgaccgactcgaaacggcgaaatcg
gagcgaaacgacagccaacgcgaacaggatcggctgctcgacgcggcccgacgccggtcg
aacgaacgacgtgagcttgaagaagaaatcgaatcgctcgaagaaacgatccccgaactc
aaagcaaagcgaacggacaccgaaacggaactcgaagctgccaaagaaaacaaagccacg
atccaatcagcggtcaacgacctcagagacgagaaatatgagcttcaatcggaactcgac
gagatcgaagacgagctgaacgcgacccaacaggagtacgccgaactcgaagcgaacacc
gacgacggtacgaacacgtcctacggtcgcgcggtgtcgacggttctcaacagcgggatc
gacggcgttcacggaacggtgagccaactcggaagcatctccgggcggtatgcggtcgcg
tgtgaaacggcggcaggaggacggctcgcccacgtggtcgtcgaggacgatggggtcgga
cagcgctgtatcgaacacctccagtcccgcaacgcaggccgggcgacgtttctcccgata
tcggagatgcagcgccgctcgctgccctcgcttccgggacacgcgggcgtggtcgatttc
gcgtacaacttggtggagttcgatcgccagtacgccggcgtcttcgcgtacgtactgggt
gacaccctcgttgtcgaagacatcgacaccggccgcgagctgatgggagagttccggatg
gctacgcttgggggggatttgatcgagaaaagcggtgcgatgaccggcggttcgaacaac
ggcacccggtactcgttttcttccgataccagccggctcgaacaggtcgcagagcgcatc
accgaactcgaagaccggcgtcgatcgctccgagaagatcttcgatcggtcgagtcccgt
ctcgacgacgcccgggagcgccagtccgctgccaccgatcaagtgcgcgatatcagggct
gagcgcacggagatcgacgaacgcatcgaatccacgaagaaagcgatcgaagaaaaagaa
acggagatcacggagatcgaacgcgcccgtgaggagaccgacgagcagatggcagcgatc
gaagacgagatcacggagaaagacgagacgatcgctgcgatcgaagacgagatcaccgat
ctcgaagccgaactccgatcctcggccgtcgcagagcttaccgaccgcgcggaaaccctc
cgagaaacgatcgccgatctcgaagacgatatgcggaagatcgacgaagacctcaacgag
ttgaagcttgagcgggagtacgcggaggagacgatcgatgatctcgaagacgagatcgaa
actgcaaaagaacgtaacgccgccgcgatcgagcgtatcgaggaactcgaagcggagatc
gaagacgagaacgcacgtctcgaacgcaaacacgagcaggtggcagagctagaagaagaa
ctagctgatctcaaagccgagcgaacggaactcaaaacggagctgcaggaggcccgtgag
agctacgagacggcaaacgacgcggtcgatcgtgcagaaagccggctcgaatcgcttcgg
gagcgggaaacgcggctccaagaggagatcgaggagctgtccgaacaggtcggttcgtac
gatcccgatgcgattccctcccacgagacactcgaacgcgagatcgatcgactccaagag
gagatggtggcgctcgaaccggtcaacatgctcgccatcgaggagtacgatcgcgtctca
gaggagctgaccgatctcgaaacgcgccgggagacgctcacagaggagcgtgatgccatc
cagacccgcatcgaggagttcgagaccagaaagagatcgacgtttatggacgcgtatgaa
gggatcaacgaacagttcgaggggatctttgcgcggttgtccgacggatcaggcacgctg
tttctcgaagatgaagaggatccgttcgcgggcggtctaacgatgaaggcccagcccggc
gacaaaccggttcagcggctcgcggcgatgtccggtggtgaaaaatccctaactgcgctc
gcgttcatctttgcgatccagcggtacaaccccgcgccgttttacgcactcgacgaggtc
gacgcgtttttggacgcggccaacgccgacgccgtcggcgaactcatcgacgaactcgcc
ggtgacgctcagttcgtcgtcgtctcacaccggtcggcgctgctcgaacggtccgaacgg
gccatcggcgtcaccatgcagggcaacaacatcagcgcagtcacggggatccacctgagc
gattccgatgcggacagtgaggtaccggcggatgactga
DBGET
integrated database retrieval system
