Halocatena salina: MW046_08215
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Entry
MW046_08215 CDS
T08090
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
haad
Halocatena salina
Pathway
haad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MW046_08215 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haad03019
]
MW046_08215 (prf1)
03012 Translation factors [BR:
haad03012
]
MW046_08215 (prf1)
Messenger RNA biogenesis [BR:
haad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MW046_08215 (prf1)
Translation factors [BR:
haad03012
]
Eukaryotic type
Release factors
MW046_08215 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_8
DUF2321
Motif
Other DBs
NCBI-ProteinID:
UPM41954
UniProt:
A0A8T9ZZ17
LinkDB
All DBs
Position
1600872..1602116
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AA seq
414 aa
AA seq
DB search
MNDDDQSDRRKYEFRKVIEELTEYSGSGTQLVSIYVPSDRQISDIVAHVTQEHSEASNIK
SKQTRTAVQDALTSIKDRLRYYDNPPENGMVLFSGAIDAGGGQTDMVTKVLEHPPQPIES
FIYHCDSAFLTEPLEEMLGDKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPGKQRK
GGQSAQRFARLRLEAIDNFYQEVAEMADDLFVPKRHEMDGVLVGGPSPTKDEFLDGEYLH
HELQDLVLGKFDVSYTDESGLSDLVDAASDVLAETEMMKDKSQMDEFFKELHQGELATYG
FESTRQNLMMGAVDRLLLSEDLRQDVVTYVCENDHEQREVIDRRKNTPDHECEQCGDVVT
AEAATREDIIEHLIDIAEQRGTETKLISTDFEEGEQLMNAFGGIAGILRYSTGI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgacgaccagtcggatcgacggaaatacgaattccggaaggtgatcgaggaa
ctcacggaatattcgggatcaggcacacaactcgtgtccatctacgttccctccgatcgt
cagatcagtgacatcgtcgctcacgtgacccaagagcacagcgaagcatcgaacatcaaa
tcaaaacagacgcgaacggcggtccaagacgctctcaccagcatcaaggatcgacttcgg
tattacgacaacccaccggaaaacgggatggtgctgttctcgggtgcgatcgacgccggt
ggtggccaaaccgacatggtaaccaaggtgctcgaacatccccctcagccgatcgagtcg
ttcatctatcactgtgattctgcctttctcaccgagccgctcgaagagatgctgggtgac
aaaggactgttcgggctgatcgttctcgatcggcgcgaggcgaacgtcggctggctcaaa
ggaaagcgagtcgaacccgtcaaaagcgcctcctcgctcgtgcccggcaagcagagaaaa
gggggacagtcggcccaacggttcgcacggctccggctcgaagccatcgacaacttctat
caagaggtcgcggagatggcagacgacctgttcgttcccaaacgccacgaaatggacggc
gtactcgtcggcggtccgtcaccgaccaaagacgagttcttggacggcgagtatctccac
cacgagctacaggatctcgtgctcgggaagttcgacgtctcctacaccgacgagtccggc
ctgtcggacctcgtcgatgccgccagtgacgtgctcgccgaaacggagatgatgaaggac
aagtcccagatggacgagttcttcaaggaactccaccaaggggagcttgcgacctacggc
ttcgagtcgacccgacagaacctcatgatgggagccgtcgatcggttgttgctgagcgag
gatctccgtcaggacgtggtcacctacgtctgtgagaacgaccacgaacaacgggaagta
atcgaccgccggaagaacacgccggatcacgaatgtgaacagtgtggggatgtcgttacc
gctgaagctgctacccgagaagacatcatcgagcacctgatcgacatcgcagaacagcgt
ggaaccgaaacgaaactcatctccacggacttcgaggaaggcgaacaactgatgaacgcg
ttcggtggcatcgctggtatcctgcggtattctaccggtatctag
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