Halocatena salina: MW046_08995
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Entry
MW046_08995 CDS
T08090
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
haad
Halocatena salina
Pathway
haad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MW046_08995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haad03021
]
MW046_08995
Transcription machinery [BR:
haad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MW046_08995
Prokaryotic type
Archaeal type
TFB
MW046_08995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cyclin_C
Zn_ribbon_3
DZR
Cas12f1-like_TNB
Zn_ribbon_RRN7
Sigma70_r4
Zn_ribbon_LysW
Auto_anti-p27
DUF7573
HTH_24
DUF7577
DZR_2
Zn_ribbon_8
DUF8046
Zn_ribbon_Nudix
DUF7575
DUF2703
Motif
Other DBs
NCBI-ProteinID:
UPM42100
UniProt:
A0A8T9ZZA1
LinkDB
All DBs
Position
complement(1764595..1765596)
Genome browser
AA seq
333 aa
AA seq
DB search
MERRRSTNSIVMESHCRPTGTETGCFISMNLATPTQQSCPHCGATVVADPRRGETVCTEC
GTVLEEEAVDHGPEWTAYNSREYAEVARTGGPTSMTMHDKGLSTFISDRDRDASGRQLSA
RKRNQMRRLRTWNERCRTRDATERNLKQAFTEINRMASALGLPQSVRETASVIYRRALDE
GLLVGRSIEGVAAAGVYAAARQESIPRTLDEVTTVARVDRNRIARAYRTVGGELGLAIEP
ADPTAFLPRFASGVDCSETVHRQAHDLLESVAGTTYTSGKNPAGLAAAALYASACLTGER
ITQQEISSVADITSMTIRTHYRDLIEHAQVEKD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcgtcgaagtacgaacagcatcgtcatggaatcacactgtcgaccgacaggc
accgaaaccggctgtttcatcagtatgaatctcgccaccccaactcagcaatcgtgtcct
cactgcggcgcgacagttgtcgccgatccgcgccgtggagaaacggtgtgtaccgaatgt
ggcaccgttctcgaagaagaggccgtagaccacggaccggagtggacagcctacaactcg
cgtgagtatgcggaagtcgcgcgcaccggcggaccgacatcgatgacgatgcacgacaaa
gggttgtcgacgttcatcagcgatcgggatcgggacgcttccggacggcagctcagcgcg
cgcaagcgaaaccagatgcgacggcttcgaacgtggaacgagcggtgtcggacgcgggat
gccacggagcgcaacctcaaacaggcgtttacggagatcaatcggatggcgagtgcactc
ggactaccccagtccgttcgagagaccgcgagcgtcatctatcgacgggcactcgatgag
gggttgttggtcgggcggtcgatcgaaggtgtcgcggccgcaggcgtgtacgcggcagcc
cgtcaggaaagcattccccgcacgctcgacgaagtgacgacggtcgcccgtgtcgaccgc
aatcggatcgcacgggcctatcgaaccgtcggtggagagttagggctggcgatcgagccg
gccgatccgacggcgtttctgcctcgctttgcgtcgggcgtagactgctccgaaacagtc
catcgacaagcccacgatctgctcgaatccgtcgctggcaccacgtatacgagcggcaag
aatccagcagggttggctgctgctgcgctgtacgccagcgcctgcctgaccggtgagcgg
atcactcaacaggagatcagcagcgttgccgatatcacgagcatgacgatccgtactcac
taccgagatctgatcgagcatgcccaagtcgagaaggactga
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