Halocatena salina: MW046_09065
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Entry
MW046_09065 CDS
T08090
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
haad
Halocatena salina
Pathway
haad03030
DNA replication
haad03420
Nucleotide excision repair
haad03430
Mismatch repair
haad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MW046_09065
03420 Nucleotide excision repair
MW046_09065
03430 Mismatch repair
MW046_09065
03440 Homologous recombination
MW046_09065
03460 Fanconi anemia pathway
MW046_09065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haad03000
]
MW046_09065
03032 DNA replication proteins [BR:
haad03032
]
MW046_09065
03400 DNA repair and recombination proteins [BR:
haad03400
]
MW046_09065
Transcription factors [BR:
haad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MW046_09065
DNA replication proteins [BR:
haad03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MW046_09065
DNA repair and recombination proteins [BR:
haad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MW046_09065
MMR (mismatch excision repair)
MW046_09065
DSBR (double strand breaks repair)
HR (homologous recombination)
MW046_09065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
Motif
Other DBs
NCBI-ProteinID:
UPM42113
UniProt:
A0A8U0A248
LinkDB
All DBs
Position
1776915..1778357
Genome browser
AA seq
480 aa
AA seq
DB search
MSQIEDLYEELDPDVSQEAFRDAVEAKTEEMAGLVDTETAAQIVVHEVSDSQPNSIAAID
PGPTEVAFVGKVTSVGELRTFERDGTDGSDDDQDDGHVLNIEVADETGRIRVSLWDDRAI
AAAEELACEQVLRIKGRPTDGYSGIEVSASRIEPAPDTEIDVSVDPETTIEGLSMDQYDV
TLTARVLATEPVRTFTRDDGSDGRVSNLLIGDESGHVRVALWDEQADSVDDLSSGTSIEI
IDGSVSERDGQLELHVGNGGTVEPIDEEVEFVLDAASIESLEVGQTADIAGVIRSTDSKR
TFERDDGSEGQVRNVRVQDQTADIRVALWGEKADIDIAPGDEALFAGVEIEDGWKDSIEA
SAGWRSTVTVLDDDASSGDAANTTDTTGATSSGADDRAETGSGSLVAFTDGETAASTTEH
QTSTERQEFTGTVVQTGDPVILDDGQTTISVATDVDVHLGEEITVHGRIRDGTLDADDVL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcgaggatctctacgaggaactagatcccgacgtcagtcaggaggcgttt
cgggacgctgtcgaggcaaagaccgaagagatggccggtctcgtcgacacggaaaccgcc
gcacagatcgtcgtccatgaggtttccgacagccagccgaactcgatcgcggcgatcgat
ccgggtccgacggaggtagcgttcgtcggtaaggtgacgtccgtcggcgagctccgaacg
ttcgaacgcgacggcaccgatggcagcgacgacgatcaggacgacggccacgtgttgaac
atcgaggttgctgacgaaaccggccggattcgcgtttcgttgtgggatgatcgcgcgatc
gcggccgccgaggaactagcctgtgagcaggtgcttcgaatcaaaggtcggccgacagat
ggctactccgggatcgaggtgagcgcgagtcgcatcgaacccgcacccgacaccgagatc
gacgtgtctgtcgatcctgagaccaccatcgagggtctttcgatggaccagtacgacgtg
acgcttacggcgcgagtgctcgccacggaaccagtgcgtacgttcacccgagacgatgga
agcgacggtcgcgtttcgaacctcctgatcggtgatgagtcgggacacgttcgcgtcgca
ttgtgggacgaacaggccgacagcgttgacgatctctcgtctggaacatcgatcgagatc
atcgatggctccgtgagcgagcgcgatggacagctcgaactccacgtcggaaacggtggc
accgtcgaaccgatcgacgaggaagtcgagttcgttctcgatgcggcgtcgatcgagtcg
cttgaggtcggacaaacggccgacatcgccggcgtcatccggtcgaccgattcaaagcga
acgtttgagcgcgatgatggaagcgagggacaggtccgaaacgtccgcgttcaggatcag
acggccgacatccgcgtcgcgctctggggtgagaaggccgatatcgatatcgcaccgggg
gatgaggcgttgtttgcgggcgtcgagatcgaagacgggtggaaggattccatagaagcc
tcggccggatggcgatcgacggtcacggtgttggacgacgacgcgtcaagtggggatgct
gcgaacacgacggacacgacaggagctacttcgtcgggggcggacgaccgagcggagacg
ggaagtggttccctcgtcgcgttcactgacggggagaccgctgccagtactactgagcac
cagacgagcaccgaacggcaggagttcactgggactgtcgttcaaactggtgacccggtg
attctcgatgacggacagacgaccatttcggtcgcaaccgatgtggatgtgcatcttgga
gaggagatcactgttcacggccggatcagagacggcacgctcgacgctgacgatgtccta
tga
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