Halocatena salina: MW046_09490
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Entry
MW046_09490 CDS
T08090
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haad
Halocatena salina
Pathway
haad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MW046_09490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haad03021
]
MW046_09490
Transcription machinery [BR:
haad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MW046_09490
Prokaryotic type
Archaeal type
TFB
MW046_09490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_tTFIIB
Anti-TRAP
Cyclin_C
Zn_ribbon_3
HTH_Tnp_ISL3
DZR
Zn_ribbon_LysW
A2L_zn_ribbon
Auto_anti-p27
Zn_ribbon_PaaD
DUF7575
Motif
Other DBs
NCBI-ProteinID:
UPM42191
UniProt:
A0A8T9ZZF7
LinkDB
All DBs
Position
1859668..1860630
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AA seq
320 aa
AA seq
DB search
MSDSNTRIRERTEEQETEDTGETVNCPECGGKLATDSEHGETVCIECGLVVETDEIDRGP
EWRAFDATEKDKKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLGSRQRAKMQRLRKWN
ERFRTRDSKERNLKQALGEIDRMSSALGLPETVRETASVIYRRALDENLLPGRSIEGVAT
SAVYAAARQAGVPRSLDEISDVSRVEKSEIARTYRYVVRELGLEVKPADPESYVPRFASS
LGLSDEAENRARQLLRSAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADIS
EVTIRNRYHELLEAEQDLPA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcgaacacgcgaatccgagaacgtacagaggaacaggagacggaggacaca
ggagagacggtaaactgtccggagtgtggtggcaaactcgcaacggacagcgaacacggt
gagacggtttgtatagagtgtgggctcgtcgtcgagactgacgagatcgaccgtggacca
gagtggcgggcgtttgacgccacagagaaggacaagaagtcccgcgttggggccccgaca
accaacatgatgcacgacaaggggttgtcgaccaacatcgactggcgggataaggacgcc
tacggcaactcgcttggatcgcgccaacgcgcgaaaatgcagcggctgcgcaagtggaac
gagcggttccggacacgggactccaaagagcgcaacctgaaacaggcattgggtgagatt
gaccgcatgagttcggctctcggtctgcccgaaaccgtccgcgagaccgcgtcagtgatc
taccggcgcgcgctggatgagaaccttctgccggggcgctcgatcgagggcgtcgctacg
tccgcggtgtacgccgctgcacggcaggcaggggttccccggagtcttgatgagatatcc
gacgtatcccgggtcgagaagagtgagatcgcgcgcacctaccggtacgtcgtccgggag
ctcggtctcgaagtcaaacctgccgatccggaaagttacgtgccacgttttgcatcgtcg
ctcggtctctctgatgaggccgaaaatcgggcgcgccaactccttcgtagcgccaaagaa
cagggcgttcattcggggaaaagcccggtcggattggctgccgctgcggtgtatgctgct
gccctcctcacgaacgagaagacgacacaggcggctgtcagcgaagtcgctgatatctcc
gaagtcacgatccgtaatcggtatcacgaactacttgaagctgagcaggatctaccggcg
taa
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