Halocatena salina: MW046_11420
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Entry
MW046_11420 CDS
T08090
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haad
Halocatena salina
Pathway
haad03420
Nucleotide excision repair
haad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MW046_11420
03430 Mismatch repair
MW046_11420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haad03400
]
MW046_11420
Enzymes [BR:
haad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MW046_11420
DNA repair and recombination proteins [BR:
haad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MW046_11420
MMR (mismatch excision repair)
Other MMR factors
MW046_11420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UPM42559
UniProt:
A0A8U0A197
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All DBs
Position
2220490..2222319
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AA seq
609 aa
AA seq
DB search
MTQTRVTRLFGGPGCGKTTALLDRVDEMLDSGVRVEDILIVSYTRAAAAEVRERLAERLD
CSPRSLKGNVCTMHAKAYELLNLSRNDVVGESDKQEFCEEYGLDYEDEYDSSRRRSSRST
TIGNKIIATSQWLQRTSRDVAQWHAVPFQWDVETVRLPPEIDPNAQTGNKYTPTWPSDDD
RIDVPQTIRAWRGYKGENDLVGFADMLERVQQRSLVPSVDYLVIDEFQDITTLQYAVYEE
WKPHMDQALIAGDDDQVVYAWQGADPTLLLEEGGENVVLDTSYRLPSRILNVVNREIDHV
AERQEKDFQPRTDGGRVEAVSNPSMYDLMRNVRATIEESDGSVMVLFRARYQMFQFMDEF
IDQGIPFRTMTDQRMWTDRLADYIRAVEALDDETPLTGLQARRLAEMLDSAAFGTGSRDE
MFTAIEDRQDARDVDDLTDLEIEPSFIKEYAPFAPTRSSAADMAHKVTNYQKRSMGAYFG
GPYQDVDRARVRIGTIHSAKGREADHVFVATDLTEKVVEQMVATVEDPTAVPTVEEFTKH
TDPVPVLTDNERRVFYVGMSRARKRLVLLENLVDGAPTLPIDVLLNDRPSDHTLEELIAE
AQEPPVTAK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgactcagacgcgtgtgacccggttgttcggtggaccgggatgtgggaaaacgacagcg
cttctcgatcgggtcgacgaaatgctggattccggcgtacgggtcgaagatatcctcatc
gtttcgtacacccgtgcagcggcggccgaggttcgagagcggctcgcagaacgtctcgac
tgtagcccccggtcgctcaagggaaacgtttgtacgatgcacgccaaagcctacgagctg
ttgaatctctctcgcaacgacgtcgtgggcgaatctgacaaacaggagttctgtgaggag
tacggactcgattatgaggacgagtacgattcttcgcggcggcgctcttcccgatcgacg
acgatcggcaacaagatcatcgcgacgagccagtggctccaacgaacaagccgcgatgtc
gcacagtggcacgccgttccgttccagtgggacgtcgaaacggttcgtctcccaccggag
atcgatcccaacgcccagacaggaaacaagtacacgccgacgtggccgagcgacgacgac
cgcatcgacgttccacagacgatccgagcatggcgggggtataagggtgagaacgatctc
gtcgggttcgccgacatgctagagcgggtacaacaacgatcgctcgttccgtccgtcgat
tacctcgttatcgacgagtttcaggacatcacgacgcttcagtacgccgtctacgaggag
tggaaaccccacatggaccaagcgctcatcgcaggcgacgacgaccaggtcgtgtacgcg
tggcagggggccgatccgacgttgctcctcgaagaaggtggggagaacgtcgttctcgat
acgtcgtatcgattgccctcccggatcctcaacgtcgtcaaccgcgagatcgatcacgtc
gccgaacgccaagaaaaggacttccaaccccgaacggatggcgggcgggtcgaggccgtg
agcaatccttccatgtacgatctgatgcgcaacgttcgcgcgacgatcgaagagagcgac
ggcagcgtcatggtgctctttcgtgcacgctaccagatgttccaattcatggatgagttc
atcgatcagggtattccgttccggacgatgactgaccagcgaatgtggaccgaccggctc
gctgactacatccgggcggtcgaagcgctcgacgacgagacaccactcactggactccaa
gcccgtcggttggcagagatgctcgattcggctgcgttcggtaccggatcgcgcgatgag
atgtttacggccatcgaggaccgacaggacgcgcgcgacgtcgacgatctcaccgatctg
gagatcgagccgtcgttcatcaaagagtacgctcccttcgctccaacccgatcgagcgcg
gcagacatggcgcacaaggtaacgaactatcagaagcgctcgatgggagcgtacttcggc
ggtccataccaggacgtcgatcgggctcgcgttcggatcgggactatccacagcgcgaaa
ggccgtgaagccgatcacgtcttcgtcgcaaccgatctgaccgagaaggtcgtcgaacag
atggttgcgaccgtcgaggaccctacggcggtaccgaccgtcgaggagttcacgaaacac
accgatcccgttcccgtcctgaccgacaacgaacgacgcgtcttttatgtcgggatgtct
cgtgcacgcaagcggcttgtcctgcttgaaaacctcgttgacggtgctccgacgcttccc
atcgatgtgttgctcaacgatcgaccgtcagaccacacgctcgaagaactcatcgccgaa
gcgcaggaaccgcccgtcacggccaaataa
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