KEGG   Halocatena salina: MW046_11435
Entry
MW046_11435       CDS       T08090                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
haad  Halocatena salina
Pathway
haad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:haad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MW046_11435 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:haad03400]
    MW046_11435 (uvrA)
DNA repair and recombination proteins [BR:haad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MW046_11435 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MW046_11435 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 AAA_15 AAA_21 nSTAND1 AAA_25 RsgA_GTPase AAA_23 ATPase DnaJ_CXXCXGXG Viral_helicase1 cobW DUF4350 NMDAR2_C
Other DBs
NCBI-ProteinID: UPM42562
UniProt: A0A8U0A0G8
LinkDB
Position
2223487..2226444
AA seq 985 aa
MSEFIEVRGAEEHNLKDIDVSIPRESFTVVTGLSGSGKSSLAFETVYAEGQRRYIESLSA
YARNFLGQMDKPQVETVEGLSPAISIDQKNAANNPRSTVGTVTELHDYLRLLYARIGTPH
CPECGQEVGEQSAQTMVRRLFDLPERTRAKIAAPVVRDQKGAFADLFEELVSEGYSRVEV
DGTEYDLTVETPELDENFDHTIDVVVDRVTITEDARSRITDSVETALTEADGVLKVIIPD
PPENAELGAIARSTGDLSNADMASEPADADRLVAEFSEELACTRCGIDLPEIETRSFSFN
SPHGACPECEGIGETKEIDEDLVIRDPSKPLRDVFEPWSYNRSYYQTRLDSVAAHFDVSL
DTPFEETEPEIQQAFLYGTTEDVVFKRRTKNGIRRKEQPFEGIIPNLERRYVETDSQSTR
EHIEEYMATTTCPACEGTRLKPASRAVLVNDTAITEINRMSIGDALDQFEGWETQLTKRE
RIIAEEILKEIRDRLGFMCEVGLDYLTLDREASTLSGGESQRIRLATQIGSGLVGVLYVL
DEPSIGLHQRDNDRLLNTLEELRDLGNTLLVVEHDTETMRRADNVIDMGPGPGKRGGEVV
VNGDIEDVMATEKSITGDYLAGRRQIPVPDTRRDPSGQLTVRGARQHNLRDLDVSIPLGT
LTTITGVSGSGKSTLLHDVLYKGLVRRMNDTDVHPGDHDDIENVELVETVRLIDQSPIGR
TPRSNPATYTGVFDYIRELFAETALAKQRGYEKGRFSFNVKGGRCEACGGQGTVKIEMNF
LSDVYVPCEECEGARYNDETLDVTYKDRTIADVLDMSVEEAHDFFEHDPRIGRRLQLLRD
VGLDYMKLGQPSTTLSGGEAQRVKLAEELGKRNSGDTLYLLDEPTTGLHPEDERKLIDVL
QRLVDEGNTVVVVEHELDLVKNADHIVDLGPEGGEHGGDLVATGSPETVARSDDSHTGRY
LRDLLPDVELEGPRTETIRAAVGDD
NT seq 2958 nt   +upstreamnt  +downstreamnt
atgagtgagttcatcgaggtccgaggagccgaagagcacaatctcaaggacatcgatgtg
tccattcctcgcgagtcgttcacggtggtgacggggttgtctggctcgggcaagtcgtcg
ctggcgttcgagacggtgtacgccgagggccaacgccgatacatcgagagcctgtcagcg
tacgcccggaacttcctcgggcagatggacaaaccacaagtcgagacggtcgagggactt
tctcctgcgatctcgatcgatcagaaaaacgccgccaacaacccgcgctcgaccgtcgga
acggtgacggaactgcacgactacctccggttgctgtacgcccgcatcggaacgccacac
tgtccggagtgtgggcaagaagtcggcgagcagagcgcacagactatggtgcgtcggctg
ttcgatcttcccgaacgaacgcgagcgaagatcgctgcgcccgtcgtgcgcgaccagaaa
ggtgcgttcgcggatctgttcgaggaactcgtctcggaggggtactcccgtgtcgaggtg
gacggaaccgagtacgatctcaccgtcgagacgcccgaactggacgagaacttcgatcac
acgatcgatgtcgtcgtcgatcgcgtcacgatcaccgaggacgcccgctcgcgcatcacc
gacagcgtcgagacggcactcaccgaagccgatggcgtgttgaaggtgatcattccggat
ccacccgagaacgccgagttgggcgcaatagcgcgctcgacaggggatctctcgaacgct
gacatggcctctgagcctgccgacgcggatcggctcgtcgcggagttctccgaggagctt
gcgtgtacgcggtgcgggatcgatctgcccgagatcgaaacgcggagcttctcttttaac
agccctcacggtgcgtgtccggaatgtgagggcatcggcgagaccaaagagatagacgag
gatctcgtgatccgggacccatcgaagccgttgcgcgatgtcttcgagccgtggagctac
aaccgttcgtactaccagacccggctcgattcggttgcggcgcacttcgacgtgagcctc
gacacaccgttcgaagagaccgagccagaaattcaacaggcgtttctgtacggtaccact
gaagatgtcgtcttcaaacgccggacgaaaaacggtatccggcggaaggaacagccgttc
gagggaatcattccgaatctcgaacgccggtacgtcgaaaccgactcccagagcacgcgc
gagcatatcgaggagtatatggcgaccacgacgtgcccagcgtgtgagggcacgcggctc
aaacctgcgagccgagcggtgctggtcaatgacacggcgatcacggagatcaaccgaatg
agcatcggcgacgcgctcgaccagttcgaagggtgggagacgcaactgaccaagcgcgag
cgcatcatcgccgaagagatcttaaaggagatccgcgatcggttgggcttcatgtgtgag
gtcggtctcgattacctcacgctcgatcgggaggcctcgacgctctccggtggagagagc
cagcggatccggttggcaacccagatcggttccgggctggtcggcgtgctgtacgtgctc
gatgagccatccatcggcctgcaccaacgcgataacgaccgtctgctcaacacgctcgaa
gagctacgagatctgggtaacacgctgctcgtcgtcgagcacgacaccgaaaccatgcgg
cgggcggacaacgtcatcgacatgggaccgggacccggaaagcgcggcggtgaggtcgtg
gtcaacggcgatatcgaagacgtgatggcgactgaaaagagcattaccggcgattatctc
gcgggccggcgacagataccggttcccgacacacggcgcgatccgagtgggcagctgaca
gttcgtggcgcacgccagcacaacctccgagatctcgacgtgtcgatcccgctcgggacg
ctcacgacgatcacgggcgtttccggctcgggaaaatcgacgctgttgcacgacgtgttg
tacaaaggtctcgtccggcggatgaacgacacggacgtccatcccggtgatcacgacgac
atcgagaacgtcgagctcgttgaaacggtgcgcctcatcgatcagagtccgatcggacgc
accccgcggtcgaatccggcgacatacaccggcgttttcgactacatccgcgaactgttt
gcggaaacagcgctggccaaacagcgcggctacgagaagggtcggttttccttcaacgtc
aaaggaggacggtgtgaggcgtgtggcggacagggaaccgtcaagatcgagatgaatttc
ctgtcagatgtgtacgttccctgtgaagagtgtgagggggcacggtacaacgacgagact
ctcgatgtgacgtataaggatcggaccatcgccgacgtgctcgatatgagcgtcgaggaa
gcacacgactttttcgaacacgatcctcgcatcgggcgccggctccagttgctccgggat
gtggggctcgattacatgaaactcggacagccttccacgacgctatcgggcggggaagcc
caacgggtcaaactcgcagaagaactcggtaaacggaacagtggcgacacgctgtatctc
ctcgacgaaccgacgaccggcttgcatcccgaagacgaacggaaactcatcgatgtgctc
caacgcctcgtggatgaaggcaacacggtcgtcgtcgtcgaacacgagttggatctcgtg
aaaaacgccgaccacatcgtcgatctcggtcccgagggtggggaacacggtggcgatctc
gtggcgacgggatctcccgaaaccgtcgcccggagcgacgactcccacaccgggcgctac
ctgcgcgatctcctcccggacgtagaacttgaggggccacgaacggagacgatacgagcg
gctgtaggcgacgactga

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