Halocatena salina: MW046_12850
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Entry
MW046_12850 CDS
T08090
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haad
Halocatena salina
Pathway
haad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MW046_12850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haad03021
]
MW046_12850
Transcription machinery [BR:
haad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MW046_12850
Prokaryotic type
Archaeal type
TFB
MW046_12850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_IS1595
Cyclin_C
A2L_zn_ribbon
Lar_restr_allev
Phage_zn_bind_2
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
UPM42832
UniProt:
A0A8U0A191
LinkDB
All DBs
Position
complement(2501979..2502944)
Genome browser
AA seq
321 aa
AA seq
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MTRTNDRQSERDDSTSVTQSSELECPECGCSTVYRNQERGERCCKRCGLVIEGSLIDTGP
EWRAFDASEREKKSRVGAPVTRTLHDKGLTTAISWQDRDGNGRTLSAKRREQMRRLRTWH
ERARTANNRERNLQFALSEIDRMASALGVPQSIREIASVLYRRALDEDLVRGRSIEGIAT
ATLYAACRQEGVPRSLDELTEVSRVDRSEIARTHRYVARELSLALEPADPRQYIPRFCSA
LDLSEEIKSRAMEICSTTANEGLLSGKSPTGYAAAAIYSAARLCGAGTTQSDIASVAQVT
EVTIRKRYHEQLDAIGCTIEG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcacgaacgatcgacagagtgaacgggacgattccacgtcggtgacgcagtca
tcggagctggagtgtccggagtgtggctgttcgaccgtttaccgcaatcaagagcgaggt
gaacgatgttgtaagcggtgtggtctcgtgatcgagggctcgttgatcgatacgggtccg
gagtggcgtgcgttcgatgcctccgaacgggagaaaaagtcccgcgttggcgcaccggtg
acgcggacgctacacgataaggggctgacgacagccatcagctggcaagaccgggatggc
aacggtcgtacgctctctgcgaagcgacgagagcagatgcgtcggctccgtacgtggcac
gagcgcgctcgcacggcgaacaacagagagcggaacctccagtttgccctctcggagatc
gatcgcatggccagcgcgctcggcgttccccagtcgatacgtgagatcgcatcagtgctc
taccgacgagcgctagacgaggatctcgtccgtgggcggtcaatcgaaggtatcgccacc
gctacgctgtatgccgcctgccgacaggagggcgtcccccgcagcctcgacgaactgacg
gaggtatcgcgcgtcgaccgatcggagatcgcacgaacacaccgctacgtcgcccgggaa
ctctcactcgcattggaacccgccgacccacgccagtacatcccgcggttctgctcggcg
ctcgatctctctgaggagatcaaatcgagggcgatggagatctgtagcaccacggcaaac
gaggggctgttgtcggggaaatcacccacaggatacgcagcggcagccatctactcggcg
gcacgtctctgtggcgctggaacgacccaaagcgacatcgcaagcgtcgcgcaagtgacc
gaggttacgatccggaaacgataccacgaacaactcgacgccatcggttgcacgatcgaa
ggctga
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