KEGG   Halocatena salina: MW046_13945
Entry
MW046_13945       CDS       T08090                                 
Symbol
grpE
Name
(GenBank) nucleotide exchange factor GrpE
  KO
K04043  molecular chaperone DnaK
Organism
haad  Halocatena salina
Pathway
haad03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:haad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MW046_13945 (grpE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haad03019]
    MW046_13945 (grpE)
   03110 Chaperones and folding catalysts [BR:haad03110]
    MW046_13945 (grpE)
   03029 Mitochondrial biogenesis [BR:haad03029]
    MW046_13945 (grpE)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:haad04147]
    MW046_13945 (grpE)
Messenger RNA biogenesis [BR:haad03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     MW046_13945 (grpE)
Chaperones and folding catalysts [BR:haad03110]
 Heat shock proteins
  HSP70 / DNAK
   MW046_13945 (grpE)
Mitochondrial biogenesis [BR:haad03029]
 Mitochondrial protein import machinery
  Matrix
   MMC/PAM proteins
    MW046_13945 (grpE)
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    MW046_13945 (grpE)
Exosome [BR:haad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MW046_13945 (grpE)
  Exosomal proteins of breast cancer cells
   MW046_13945 (grpE)
  Exosomal proteins of colorectal cancer cells
   MW046_13945 (grpE)
SSDB
Motif
Pfam: HSP70 GrpE MreB_Mbl FGGY_C
Other DBs
NCBI-ProteinID: UPM44528
UniProt: A0A8U0A7P4
LinkDB
Position
unnamed1:complement(224774..226642)
AA seq 622 aa
MNSTVGVMETSGPKIITDQNGVTTIPSTVALPDDGEPIAGTGVKQFARDRPDRSVRMLKP
HLGEPITVTLGDNDLTPESLTAVLLRTLTQHTEATREVSVDQAVMAVPSLASNRHRSGVH
RACELADLALARVGDDACLAGLGYGWTIGNDADRLMLICDLGAATFDVALMRMGGGVYEF
LATAGDLTLGGDDWTWAIVEWLLSEFAEQHDASSASTVRNNRYTLDRLYHTAETVKKELS
ETSETEITLPSLLTTSAESLGLQTTLSRSTFERITQDLAARLVEPIANVLASGDFDSATI
DDILLIGGGSRLPDVQRTISQTVGRPVTPAANGTDLVALGATVESGVIHGDVDDIANLSL
ITRAIGTETHCGRFEPIIERNTTIPTKETKMFVTAIDDRTSLRIPIFQGESSIAAENEYC
GELTLTDIPPASAGEQEVSEHIPREKRGDNHESTRQVVPEVIARVRRLVPPASRTGSSVS
THSQSVEEVDHTQSPLAERPGESVTGSGEHPPTDEQAETRQRCVKQLIPVRDSIAQALAH
VSNSDIHNGIEAIARQLDDVFETMNVTVFSPAPGDTVDPHRHQVVATAESDVPARTVISV
ESPGYLMNQQVLRPARVVVSQK
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgaatagcactgttggcgtgatggagacaagtggtcccaaaataatcaccgatcagaac
ggagtgaccacgattccatctactgtcgctcttcctgatgatggcgaaccgatcgcaggc
acaggtgtgaagcagttcgctcgtgaccgccctgatcgctccgttcggatgctcaagcca
catcttggagaacccatcactgtcacgctcggtgataacgacctgactcctgagtcgctg
acagcggtgctacttcgtacacttacgcaacacacagaggccacgcgggaagtgtcggtt
gatcaagccgttatggctgtgccttcgttggcatcaaatcgtcatcgctctggagtccat
cgagcctgcgaactcgccgatcttgcacttgctcgcgttggtgatgatgcatgtttagcg
ggactcggatacggctggacaatcggcaatgatgcagatcggctcatgcttatctgcgat
cttggtgctgcgacgttcgatgtcgcactcatgcgaatgggaggtggtgtctacgagttt
ctcgccacagccggtgatctaactctcggtggtgatgactggacctgggcgatcgttgag
tggctcctctccgaattcgcagagcagcatgatgcctcgtctgctagtaccgttcgcaac
aaccgctacacgcttgatcgactctaccacacagctgaaacggtgaaaaaagagctgtca
gaaacatccgagacggaaatcacgcttccatcactactaacaacatcagcggagtcgttg
ggattgcagacgacattatcccgttcgacattcgaacgcatcacgcaggaccttgctgct
cgccttgtcgaaccgattgcgaatgtacttgcaagcggtgacttcgattccgctacgatt
gatgacatcctgctcatcggcgggggctcccgattaccagacgtccaacgaactatttcc
cagacagtgggacggcctgttacgccagcagctaatgggacagacctcgttgcgctgggg
gcaacagtggaaagtggagtgatacacggagacgtcgacgatatagccaatctctcactc
atcacacgcgcaataggcactgagacacactgtggtcgattcgaaccgattattgaaaga
aacactactattccgactaaagaaacaaagatgtttgtcacagctatcgatgatcgaaca
tcgttacgtataccgatttttcagggggagagcagtatcgcggctgaaaacgagtactgt
ggagaactcaccctaacagacatccctcctgcgagcgcgggggaacaggaggtcagcgag
catattcctcgggaaaaacgtggagacaaccacgaatccactcgtcaggtcgtcccagaa
gtgattgcgcgcgttcgacggctcgtaccgccagcatctagaactggttcatcagtgtcg
acgcacagtcagtcggttgaagaagtggatcacactcagtctcctctcgccgaacgaccc
ggcgaatccgtcaccggttcaggcgaacatccccccaccgacgagcaggctgagacgaga
caaaggtgtgtcaaacagctcattcctgttcgtgattcgatcgcacaagcactcgctcac
gttagcaacagcgacattcacaatgggatcgaagctatagcgagacaactcgatgatgtg
ttcgaaacgatgaacgtgacggttttctctcccgctcctggcgacacagttgatccacat
cgccatcaggtagttgcaactgccgagagtgacgttcctgcacgtacggttatctctgtt
gagagtcctggctatctaatgaatcagcaggtccttcgaccagcacgtgtcgtcgtgagt
caaaagtga

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