Halocatena salina: MW046_16590
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Entry
MW046_16590 CDS
T08090
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
haad
Halocatena salina
Pathway
haad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MW046_16590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haad03021
]
MW046_16590
Transcription machinery [BR:
haad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MW046_16590
Prokaryotic type
Archaeal type
TFB
MW046_16590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_tTFIIB
Cyclin_C
Sigma70_r4
DZR
HTH_24
Auto_anti-p27
DZR_2
Zn_ribbon_3
Zn_ribbon_RRN7
DUF1272
HTH_Mga
C1_1
Motif
Other DBs
NCBI-ProteinID:
UPM44656
UniProt:
A0A8U0A728
LinkDB
All DBs
Position
unnamed2:complement(298092..299069)
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AA seq
325 aa
AA seq
DB search
MSETHIRTNDEQIQATTSETEDAEYEETVCPECGGSLVTDEVHGETVCEACGLVVDEESI
DHGPEWRAFNPQEKDEKSRVGAPTTNLMHDKGLSTNIGWQDKDAYGNSLNASQRQKMQRL
RTWNERFRTRDSQERNLKQALGEIERMGSALGLSESVRETASVIYRRALDEDLLPGRSIE
GVASSAIYGAARQAGTPRSIDTVVNVSRIDEMEFKRTYRYIVRELELEIEPADPESYVAQ
FASELDLSDEAERRAHELLETGKEQLIHIGKSPVGLAAAAVYAAPLLTNEQITQNEVSEV
TDISEVTIRNRYQELLDADGQTQAP
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacacacatccgaaccaacgacgaacagatccaagcaacgacttcggaaaca
gaggacgccgaatacgaagagaccgtctgccctgagtgtggcgggtcactcgtcactgat
gaggtccacggtgagaccgtctgtgaggcgtgtggactcgttgtcgatgaggagagcatc
gatcatggtcctgagtggcgtgcgttcaatccccaggaaaaagacgagaagagtcgcgtc
ggcgcaccgacgacgaatctcatgcacgataagggcctgtcgacgaacatcgggtggcag
gataaggacgcctatggcaactcgctgaacgcgagccaacgccagaagatgcagcgcctg
cgcacgtggaacgagcgctttcgcacccgtgactctcaagagcgcaacctcaagcaggca
ctcggtgagatcgagcgtatgggcagtgcgctcggactctcagaaagcgttcgtgagacc
gcgtcggtgatctaccgccgtgcactcgacgaggatctcctgcctggccggtcgatcgaa
ggtgtcgcctcgtctgccatatacggtgcggccagacaggcaggaacgccccgcagtatc
gacacggtcgtgaacgtcagccggatcgacgagatggagttcaagcggacctaccgctat
atcgttcgcgaactcgaactcgagatcgagcccgcggatccagagagctacgttgcccag
ttcgcttcggagctcgatctctcggacgaggccgagcgccgcgcccacgagttgctcgaa
accggtaaggagcagctcatccacatcggtaagagtccagtcggactggcggccgctgcg
gtgtatgctgcaccgctgctcaccaacgagcagatcacccaaaacgaggtcagtgaggta
acggacatcagtgaagtcaccatccgaaaccgataccaagagctgctcgacgccgatgga
caaactcaagcaccgtaa
DBGET
integrated database retrieval system
