Halomonas sp. A3H3: HALA3H3_210132
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Entry
HALA3H3_210132 CDS
T10226
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HALA3H3_210132 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_210132 (mutM)
Enzymes [BR:
haah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HALA3H3_210132 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HALA3H3_210132 (mutM)
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HALA3H3_210132 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CDG51599
LinkDB
All DBs
Position
hala3h3:complement(1134788..1135630)
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AA seq
280 aa
AA seq
DB search
MPELPEVETTRRGIAPYIEGQEVTEVLVRQPRLRVPVPDDLAERLVGARIGGLMRRAKYL
QIPIQAGGALEGDASATLLWHLGMSGSLRIARVGDLPKKHDHVDVVTASGYVLRYHDPRR
FGFVDWQAADAAQDKRLAHLGPEPLSDAFNGKWLYTLSRNKRVAVKPFLMDNQVVVGAGN
IYAAEALFMAGIDPRRAAGRVSRARYDALALAVKDVLAAAITQGGTTLRDFVSGQGEPGY
FAQRLNVYGRHGQPCLRCGAELRRITLGQRASVFCPGCQR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcctgaagttgaaaccacccgacgcgggattgctccctatattgaaggc
caggaagtcaccgaagtgctggtgcgtcagccgcggctgcgtgtgcctgtgcccgatgat
ctggccgagcggttggtaggtgcgcgcattggggggttgatgcggcgggcaaaatacctg
cagattcctatccaggctggcggcgcgcttgaaggtgacgctagcgcgacgctgctctgg
cacttgggtatgtcgggcagtctgcggattgcccgggtgggggatttgcctaaaaagcat
gaccacgtggacgtggtgactgccagcggctatgtgctgcgctatcacgatccccgtcgg
tttggctttgtggattggcaggccgcagacgcagcgcaggataaacggcttgctcacttg
ggccctgagccgctgtctgatgcgtttaacggcaaatggctctacacgctctcgcgcaac
aagcgcgtggcagtaaaaccgtttctgatggataaccaggtggttgttggtgccgggaat
atctacgcggcagaggcgctatttatggccggcattgatccccgccgtgcggcggggaga
gtttcccgtgctcgctatgacgccttggccctggccgtgaaagacgtgctggcggcggca
attacccaaggtggcaccacgctgcgggactttgtcagtggccagggtgagcccggctac
tttgcccaacgccttaatgtttatggccgccacggccaaccctgtttgcgctgtggcgct
gagcttcggcgcattacgcttggccagcgtgctagtgtgttctgccccggctgccagcgc
taa
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