Halomonas sp. A3H3: HALA3H3_220018
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Entry
HALA3H3_220018 CDS
T10226
Name
(GenBank) Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
Organism
haah Halomonas sp. A3H3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
DUF559
TackOD1
Motif
Other DBs
NCBI-ProteinID:
CDG51651
LinkDB
All DBs
Position
hala3h3:1188241..1193496
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AA seq
1751 aa
AA seq
DB search
MDVFEFRNQLVNDYRDFTRSFIQPKASDIITFLDSEYDGGHYWPSPLIQINPAYVTEGTV
ETLVNQKVLHPATANIFRFGKSKQSHGTPASLYKHQRQAVDCCLRLEPYVLTTGTGSGKS
LAYFIPMIDAILKDKEQDATPRVRSIVIYPMNALANSQREELEKFLADFPDDKPPVTYAR
YTGQESQEERERIMQDPPDIILTNYMMLELLMTRQSERDKAVIRHSQGLQFLVLDELHTY
RGRQGADVAMLVRRVRERMNPDLTCIGTSATMATEGTRDERRSKVAEVASKMFGQTVPPG
NVIGETLQRQIPGNMPASEALANALNNPPPANASFEYLREHPIAAWVELTLGIMKDEGEL
VRAKPKSLGEAAELLGKQSGIEVSICQDYLARFLLLAYQARDINDKPLFAFRLHQFISGA
GNLYATLEAPGKRRLDLHGQRFVPGERHKRFYTVHFCRGCGQEYYPVWHEVDVETGSLGF
QPRDIKETASGDSETSYGFLMLNHWNEEDYPENWLDFKKDPPKLKPHYKKFRPQEVHVLP
DGSQGQSGERGFYIPGGFRFCLSCGQSHVAGRDWTRLGSLSAEGRSSATTTLTLSSLRYL
LGAENDLADEARKLLGFSDNRQDAALQAGHFNDFMQILLVRAGVLASLGDNSNSVLSDQD
LAQHVFHALGLDSKDPAIRADFLSNPNARAPHARRGAEEAMRNVLGYRAYHDLRRGWRYT
VPNLEQVGLLQIEYGGLDELSELQELWNDAPPMLAQADPKIRFHVTKLVLDVMRKNLCIR
TRYLDQEEQEKFVNAAYTHLTEKWQPGDVRDMAKANHAITGSRPKGRELDLISLGSRSRL
AQELKKPASWGNGPFEPLDDKSWPPFIDAILKALCEYGLIEVENVDKELVGYQLIGEALI
WRRGSGEPERDPLAPATSQNPYFTELYQAVAQSLAHQHHDWFQFMAHEHTAQVDPEDREE
RERDFRSGDLRVMFCSPTMELGVDISSLNTVYLRNVPPTPANYAQRSGRAGRSGQPALVV
TYCAAQSPHDQYFFRDPRRMVHGQVTPPMLDLANEELVSSHLYATWLAETGVRLPAGINE
LIDVTKEEMPLGDDYANPLSKTEALKGAQQRGAQLMRLIGNDLAPAQGVWLPDNKPLETA
AADWADQQLNKAMGAFDGCFNRWRELYTSTLNQIEEASKLMTQPGSSKREREVAKRRFDE
GSIQLNLLQDNSKRQSDFETYRYLAGQGFLPGYNFPRLPLAAFIPGTRKNRRETQSRVLS
RPRFLAIAEFGPLSLIYHEGQQYRVKRVILGAVKQQQINEARLPEQQVRLCPHCGYGHFS
EQLNLDLCVACQTPLAEAKHVHNLFRIENVATRPVTRITCDEEERMRQGYDLRTTLQYPE
ENGQLKVVRSEMRHQDDVLAEMEYAQQCHIWRINLGWKRRKNTAIDGFMIDPINGNWLKD
EEQQAADDEEADMPVNQRQRISPYVADRRNALVIRPRLDMSSTTAATLQYALKRGIELNF
QLEESELMAEPLPSQHERNALMFYEAAEGGAGVLTRLATDVAAWRKVALTALELMHWKGQ
DESKPWHRLPLKQWVNADESCEAGCYRCILSYYNQPDHENIDRKDSLALEWLAKLTGLDL
NVGAGGKPAAEQKARLKRASGSSLEHAWLEALNTYQLHQPDSAQPLLEAYGVRPDFAYRE
SRALIFVDGPHHDTSQRSMIDQQQSQDLEDAGFLVIRFPKETQRWPAIFTQHPDVFGSMP
ASDKNTKESTS
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggacgttttcgagtttaggaaccagctagtaaacgattatcgcgatttcactcggtcg
ttcattcagcccaaagcatcagacatcatcactttcctagatagcgagtatgacggcggc
cactactggccatcaccacttattcagatcaacccagcttatgtcacggaaggcactgtc
gaaacactggttaatcaaaaagttttacatccagctacagccaacatatttcgctttgga
aaaagcaaacaatcccatggcacaccagcatcgttgtataagcatcagcgtcaggcagtt
gattgctgcctaaggctagagccctacgtattaacaaccggcacaggctctggcaaatca
ttggcgtacttcattccaatgatagatgcgatccttaaagacaaagagcaggacgcaaca
ccgcgagtccgctcgattgttatttatcccatgaatgcgttggccaatagccaacgagaa
gagctagagaaatttttagctgacttccctgatgataagcctccggtgacctacgcacgc
tacacaggccaggaaagccaggaggagcgcgaacggatcatgcaggatccgcccgatatt
atcctcaccaactatatgatgcttgaactgctgatgactcggcagagtgagcgcgacaaa
gccgtgattcgtcactctcaagggctgcagtttttagtattagatgagctgcatacctac
cgcggaagacaaggtgcggatgttgctatgctggttcgccgcgtgcgtgaacgcatgaat
ccggatctcacttgtattggcacgtccgcgacgatggcaacagaaggtactagagatgaa
cgacgctctaaagttgctgaagtagcgagcaagatgtttggccaaacagttccgccgggc
aatgtgattggagaaaccctgcaacgccaaatcccaggaaacatgccagcctctgaagca
ttggcaaatgctcttaacaacccgccaccggccaatgctagctttgaatatcttagagaa
caccccattgccgcttgggttgagctcacacttgggattatgaaggacgaaggagagttg
gttcgagccaaacccaaatcattgggcgaagccgctgagctcttaggcaaacaatcaggt
atagaggtctcaatctgccaagactacttggcgcgcttcctgctacttgcctaccaagca
agagatatcaacgacaaacctctctttgcttttcgcctacaccaatttatttctggcgct
ggcaacctctatgccacgcttgaagcaccaggaaagcggcgcctggatttacatgggcaa
cgctttgtccctggtgaacgccacaagcgtttttacacggtgcatttttgtcgtggttgc
ggtcaggagtattacccagtctggcatgaagttgacgtggaaacaggttcgcttggtttc
caacctcgtgatatcaaagaaaccgctagtggtgacagcgaaacctcttacgggttctta
atgctgaaccactggaatgaagaggattaccccgaaaactggctagatttcaaaaaagac
ccacctaagctcaaaccacactacaagaaattccgtccacaagaagtgcatgtactgcct
gatgggtcgcaagggcagagtggtgaacgaggcttttatataccaggcggctttcgcttt
tgcctttcatgcggtcaatctcacgttgctggtcgagactggacgcgccttgggtctcta
tcagctgaaggccgtagctccgcgacgacgacactgacgctatcttcactgcgttatttg
ctaggcgccgaaaacgatcttgctgacgaagcacgcaagctcttgggtttcagcgataac
cgtcaggatgctgcgcttcaggccggtcacttcaatgactttatgcagattctactggta
cgcgctggcgttttggcctcgctaggcgacaacagtaacagcgtgctctcagatcaggat
ctagcccagcacgtttttcatgcattaggcttggatagtaaagatcctgctattagggct
gacttcctctctaatccaaatgctcgtgcaccgcatgccagacgcggtgccgaagaagcc
atgcgtaatgtccttggttatcgcgcttatcacgatttgcgccgtggctggcgctatacc
gtacccaacctagagcaggtaggactgctacaaattgaatacggtggcctggatgaactt
agcgagctccaggaactctggaatgatgccccgccgatgctagcgcaagcagaccccaaa
atacgttttcatgtgacaaaactagtgctggatgtcatgcggaaaaatctctgtatacgc
acgcgatatcttgatcaggaagaacaggagaagttcgtcaacgccgcctacacacatcta
acggaaaaatggcagccaggtgacgtgcgcgatatggcaaaagccaaccacgctatcact
ggcagtcgaccaaaagggcgtgaactagatttaatttcacttggcagccgttctcgcctc
gcccaagagctaaaaaagcccgctagttggggtaacgggccatttgagccgctagatgat
aaaagttggcctcccttcatcgacgcgatactgaaagcgctgtgcgagtatggcttgatt
gaagttgaaaatgtcgataaggagctggtcggctatcagctgattggggaagcactgatt
tggcgtcgcgggtctggtgagccagagcgcgacccattagcaccagccaccagtcaaaac
ccctatttcactgagctttaccaagcggtggcacaaagtctcgcacatcaacaccatgac
tggttccagttcatggcacacgaacacacagcccaagtagacccagaggaccgagaagag
cgtgagcgcgatttccgtagcggtgatctacgcgtaatgttctgctcacctacgatggag
ctcggtgtcgacattagctcactgaatactgtttacctccgcaatgtcccgccaacacct
gccaactatgcacaacgcagcggtcgtgcaggacgctcaggccaacctgctctagtcgtg
acttactgtgccgcgcaaagccctcatgaccagtatttcttccgtgacccaagacgtatg
gttcatggccaagtaacaccgcccatgctggatctcgccaatgaagagctagttagcagc
cacctttatgcgacttggctggccgaaaccggtgttaggctgcccgccggtatcaatgaa
ctcattgatgtaacgaaagaggagatgccgttaggagacgactatgccaacccgctaagc
aaaacggaagcgctaaaaggcgctcagcagcggggtgctcagctaatgcgcttaatcgga
aatgatttagcccctgctcagggcgtatggcttccagataataagcccctggaaaccgct
gctgctgactgggctgatcagcagcttaacaaggccatgggagcttttgatggttgtttc
aaccgatggcgtgagctttacacgtcgacgcttaatcagattgaagaagcttctaagttg
atgacccagcctggtagcagcaagcgagaacgtgaggtcgcaaaaagacgcttcgacgaa
ggctcgatccagctcaacttgctacaagacaacagcaaacgacaatccgattttgaaacg
tatcgctacctggcaggtcaaggctttcttcctggatataattttccacgtttacctctg
gctgccttcattcctggcacacgcaagaaccgcagggagacacaaagtcgcgtgctctca
cgcccacgttttctagcgattgccgagtttggcccactgagcctaatctatcacgaagga
caacaatatcgtgtcaaacgcgtcattctgggtgctgtaaagcaacaacaaattaacgaa
gcaaggcttccagaacagcaagtccgcctttgcccacattgtggttatggccacttcagc
gaacaactcaacttggatttgtgcgttgcctgtcaaacaccactggcagaagcgaaacac
gtccacaacctgtttcgtattgaaaatgtggcaactcgcccggtgacgcgtatcacgtgt
gatgaagaagagcgcatgcgtcaggggtatgatttacgcacgacactgcaatatcccgaa
gagaatgggcagcttaaagtagtacgaagcgaaatgcgtcatcaagatgacgtgctcgcc
gagatggagtacgcccagcaatgtcatatttggcgaatcaacttagggtggaaacggcgc
aaaaataccgcaatagacggctttatgatcgaccccatcaacggcaactggctcaaggac
gaagaacaacaagccgctgatgatgaagaggcagacatgccagtcaaccaacgtcagcgc
atttcgccctatgtcgctgaccgccgcaacgccctagtgattcgcccgcgcctagatatg
tcatcgacaacagcagcgacactacaatacgcgctaaaacgcggtatcgagctcaacttc
cagttggaagagagtgagttgatggcggaacctcttcccagtcagcatgagcgcaatgcc
ctgatgttttacgaagcagccgaggggggagcaggcgtattaacgcgactagccaccgat
gtcgccgcctggcgaaaagtcgctctcactgccctggagctgatgcattggaagggacaa
gatgaaagcaaaccctggcacagactaccactgaaacaatgggttaatgcggatgagagc
tgtgaagctggatgctaccgctgcatcctgagctactacaaccagcctgaccatgaaaac
atcgatcgcaaagactctctcgcgttggagtggcttgccaagctaactggccttgacctc
aacgtaggagctggggggaaaccagctgctgagcagaaagcgcgactaaaacgcgccagt
ggtagcagccttgagcatgcttggcttgaggcattgaacacttatcagctacaccagccg
gattcagcgcaaccgctgttagaagcctatggagtacgaccggacttcgcttatcgagaa
agccgtgcactaatttttgtcgatggccctcatcacgatacgtcacagcgcagcatgatc
gatcaacaacaatcgcaagatctcgaagatgctggttttttggtaatccgcttcccgaaa
gaaacacagcgctggcctgccatctttacgcaacacccggatgttttcggcagcatgcct
gcctctgataaaaatactaaggagagcacttcatga
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integrated database retrieval system
