Halomonas sp. A3H3: HALA3H3_260023
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Entry
HALA3H3_260023 CDS
T10226
Name
(GenBank) Exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALA3H3_260023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_260023
Enzymes [BR:
haah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HALA3H3_260023
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HALA3H3_260023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CDG51737
LinkDB
All DBs
Position
hala3h3:1283223..1286900
Genome browser
AA seq
1225 aa
AA seq
DB search
MAAYSAPNAHEKRTQGLIVLQGNRMEDLRDVTMAWLAHRPLHPLEKTTFLVQSNGIAQWL
KISMAETQGGVGRGISLGADVMLPARFQWQAYRQVIDAATGDNSVPKSSPFDKGQLRWQI
LTILPDVLKDPRFEPLARYLEEDPDTRKRYQLAERIADLFDQYQVYRADWLTAWEQGDDI
LTQGFLDSAARQQPLDDEHLWQPTLWRLLGDTIAERLGEEARHSHRGAIHQRFKTAANEL
SQRPEGLSPRIVVFGISSLPLQMIEVLAALSPLSEVILCLLNPCQHYWGDIIETRDALRR
HHRQRRKQGMPADLHATPEALHLHAHPLLAAWGKQGRDYLHLLSEYDATEQYQDAFTALQ
QPVDCFVTPDTRYLLGQLQDDLLDLRPAAESQGRWPALSATDRSITFTVCHGPQRELEVL
HDQLLAAFGEDASLQPRDIIVMVPNINDYAPYIEAVFGQFSPHERRYLPYHLADQQRRHR
EPLLVALETLLTLPQRRFRTSEVLELLDIPPLRHAFGLEESDLPTLQRWVRDTNIRWGLN
AQQRASLDLPEHDELHTWRFGLERMLMGYAIGAPAETGDDWEGIVPFDEVAGLDARIAGS
LYRLISALEDYRERLDTSQSADGWSAVLGKLIVTFLAPTSPREEQLLGHVQTTLDAWQQE
IHDAQMDLPINLAVVRESWLSRIDEPQLAQNFIVGRVTFATLMPMRAIPFRHVYMLGMQE
GAYPRKSQAPDFDLMAIRGHYRPGDRSRRDDDRYLFLEALLSARERLVISWCGFSAQDNQ
EQPPSVLVGQLRDHIAAGWRLAAQDTPARLSADEREKQRRSLLATLTVEHPLQPFGHAYF
DKTSPLFTYAREWQGVRSTTSGPSLLQVSASLPLWQPESTVTLSALASFMRDPVSALFQQ
RLATSMRDDHTTSEDDEPFDFDSLEKWQQRDAILQYLGQRLTSDRNADIDLLFQETVDTR
QRAGHYPPSPVGPLVQHTLLEHLPDTLSAYQTLLRRYPDAAHPVVSVSHAAEITPNTLAP
FQHTQPVHITLSDTLDNVFCSETETARIVLLSSHLHQGNSWHWNQIMRHWPAHLALQLTH
PESSTHLVSPSGTLAIPGFPKAQAAEWLDRLIRQWFSAMQAPLPTHSSLAFTLFEYAPDG
VDPLDIEALCQNEKLVEEWEKAFDKLSQRSPMTVRELPTLEDFLSNDQFLTTCQDVYRDL
YDWVAELTATEHPTAEHPDTEQEAR
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctactctgctcctaatgcccatgaaaaacgaacccaaggccttattgtcctt
cagggcaaccgcatggaagatctgcgtgatgtcacgatggcgtggctagcccaccgcccc
ctgcatccgctggagaaaaccacgtttctcgtacaaagcaacggcattgcccaatggctg
aagatttctatggccgagacgcagggtggagtaggcagaggcatcagccttggcgcagat
gtcatgctgccagcgcgcttccagtggcaggcttaccgccaagtgattgacgccgcgacg
ggtgacaacagcgtgcccaaaagctcgccctttgataagggccagctacgttggcagatc
ctcactatattgcccgacgttttaaaggatccccgctttgagccactggctcgctatctt
gaggaggatccggatacacgcaagcggtatcagttagccgaacgcattgccgatctgttc
gatcagtatcaggtctatcgcgcagactggctaacggcctgggagcaaggcgatgacatc
ctcacgcagggttttttagatagcgcagcacgccaacagccgttagacgatgagcactta
tggcaacctacgctatggcgcttactgggtgacacgattgctgagcgcttgggggaggag
gctcgccatagtcaccgcggcgcgatacatcagcgctttaaaacggcggctaacgaactc
tctcaacgaccagaaggcctctcccccagaatcgtggtgtttggcatttcatccctgccc
cttcagatgatcgaagtgcttgccgcgctttcgccgctatcagaagtgattttatgtttg
ctcaatccttgccagcactattggggcgatattattgagacgcgagatgcactgcggcgc
catcatcgacaacgtcgtaaacaaggcatgcctgccgatttacatgcgacaccggaagcg
ttgcatctacatgcgcacccactgctggccgcctggggaaagcagggacgtgattatcta
cacctgctcagcgaatacgacgcgactgagcagtatcaagacgcctttacggcgctccaa
cagcccgttgactgctttgtcacaccggatacgcgttatttattgggccagttacaggat
gaccttttagatttacggccggcggctgaaagccagggccgctggccagcgctgagcgcc
acggatcgttcaatcacctttacggtctgtcatgggccgcagcgcgaactggaagtgctc
cacgaccagctgttagcggcctttggggaggatgcctcgctacagccacgcgatattatc
gtcatggtgccgaacatcaacgactatgccccgtacattgaagccgtattcggccagttt
tcgccccatgaacgccgctacctgccctatcatcttgccgaccaacagcgccgccaccgc
gagcctctcctagtcgcgctcgaaacgttattaacgctaccacagcggcgctttcgcacc
agcgaagtgttggagctccttgatatcccaccattacggcatgcctttgggcttgaagag
agcgacctccccacccttcagcgctgggttcgtgacaccaatatccgctggggactcaat
gctcagcaacgcgcttcactcgatctgccggagcatgacgagttacatacgtggcgcttt
ggtcttgagcgcatgctcatggggtatgccattggagcccctgctgagaccggcgatgac
tgggaaggcattgtgccgtttgatgaagtggccggcctagatgcacgcattgccggctca
ctttaccggctcatttccgcccttgaggactatcgagagcgcttggatacctcacagtca
gcggacggctggtcagcggtattaggcaaactgatcgttaccttcttagcgcctacttct
ccacgcgaagaacagctgttagggcacgtgcaaaccacgttagacgcgtggcagcaagag
attcacgatgctcaaatggatctgcctattaacttggcggtagtacgcgagagctggctg
tcgcgtatcgatgaacctcagttggcacagaactttatcgtggggcgcgtcacctttgcg
acactgatgccgatgcgcgcgatccccttccgccacgtgtacatgctgggtatgcaggaa
ggcgcctaccctcgtaaaagccaagctcccgactttgatctcatggccattcgcggacac
taccgcccgggtgatcgctcacgacgtgacgacgatcgatatctgttcctcgaagccttg
ttgtcagcacgcgagcgtctagtgattagttggtgtggttttagcgcacaagataaccaa
gaacagccgcctagcgtgctagtggggcaactgcgtgatcatattgccgctggttggcgg
ctagcagcgcaggacacgccagcgcgtttatccgccgatgagcgcgaaaaacagcggcgt
agcctgctggccaccttaaccgtagagcatccacttcaaccctttggtcatgcgtatttt
gataaaacctcgccactgtttacgtatgcccgcgagtggcaaggcgtccgctcaacaacc
tctgggccctcattgttgcaagtctctgcctcgctaccgttatggcaaccagaaagcacg
gtgacgctgagtgccctggccagctttatgcgcgatcccgtgagtgcactgtttcagcag
cggctagcaacgtccatgcgtgacgatcacacgacgagtgaagacgacgaaccgtttgac
tttgactctcttgaaaagtggcaacagcgcgacgccatattgcagtatctaggccagcgc
ctcaccagcgatcgaaatgccgacattgatcttctttttcaagaaacagtcgacacacgc
cagcgcgcaggccactacccgccttcaccggtaggccccctcgtgcaacatacattgtta
gagcatttgcctgacaccctctccgcctaccagacactgctgcgtcgctatcctgacgcc
gcccacccggtggtctcggtgtctcacgctgcagagatcacacctaacacgctagcgcct
tttcaacacactcaaccagtgcatatcaccctaagcgatacgctggataatgtgttctgt
agcgagacggaaacagcacggatcgtattactttccagccatctgcaccaaggtaacagc
tggcattggaaccagatcatgcgccactggccagcacatctagcgctacagctcacccac
ccagaatcatcaacgcacctggtatcaccaagcggtaccttggccatacccggctttccc
aaagcccaggcggcagagtggttggataggctaattcgtcaatggtttagcgccatgcag
gcgccattacccacgcattcttcactggcatttacgctatttgaatacgcacctgatggc
gttgacccactcgatatagaggcgttatgccaaaacgaaaagctagtggaggaatgggaa
aaggctttcgacaagctctcgcagcgaagtcctatgacagtgcgtgagttacctaccctg
gaagattttttatctaacgaccagtttttgactacttgccaggatgtttaccgtgacctc
tacgactgggtagccgagctaacagccactgagcatccaaccgctgagcacccagatact
gaacaggaggcacgctaa
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