Halomonas sp. A3H3: HALA3H3_260024
Help
Entry
HALA3H3_260024 CDS
T10226
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALA3H3_260024 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_260024 (recB)
Enzymes [BR:
haah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HALA3H3_260024 (recB)
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HALA3H3_260024 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
DUF294
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CDG51738
LinkDB
All DBs
Position
hala3h3:1286900..1290658
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTLPSTESSSTPLALGLPLRGSQLIEASAGTGKTFTIALLYVRLVLGHGQPDDDSHSFT
NGFTMPLVPPDILVVTFTEAASQELKDRIRARLVQAAEAFRATEGDDGLHQSDPLLAQLR
DDYPRAHWPLCARRLEVAAEWMDDAAISTIHSWAQRMLKEHAFDSGKLFHQEIVKDLTSL
TQEAVFDYWRTRIYPMDAPMAGVMMELFASPIALHGALRTLLQRHDVQLCFAGAPLPKKD
LQAQLRGLLPAREALNEAEDKARQAYCQDAEAIHQALHGLRSKLNGNKFRGKNDDTTFAS
WLAELNDWGRGKRCLAACKFVPKLATSQLLVNKGTTLPTFEIHEALEAWHELSTSLHTQA
KELKPLVLADAREWVSNRVNKQLSQRAEMGFDGMIQGLADALSGKGGDALAHRLRTQFPV
AMIDEFQDTDPAQYRIFDAIYQVQESDPSSALILIGDPKQAIYGFRGGDIYTYLKARAAT
SPRHHTLATNFRSSANVVASVNQLFRHAENAFTRKAFRFANETTQENPMPFTPAGANGRK
EALVLNSKPTAALTAWWVGEDDEPVNKKRYLAQAARHCANQIASWLNGAASNASGFENTT
GQAFRPLQASDIAILVRDRTEAAAIRSALSERQLASVYLSDRDSVFATPEAKDCWRWLKA
IAHPEEVSTLRAALATPTLGMSLAQLDELHHNELAWEATQERFAEYRARWHRQGVLPALR
QLMHDYRVPEQLLAKPQGERCLTNLLHLAEWAQQASDTLDGDHALIRVLGEHIQDPKRDE
QILRLESDADLIQVVTIFKSKGLEYPIVALPFIATFKEINGKWGTPLFHDEGGNAFLELA
NSKDEAKEGFEAANDERLSEDMRLLYVALTRARHATFIGLAPLKHGSSKKAQIDKSGIGY
LLGGGKVLPDLGSIKNAWQVHSEACAHITSHPATSEEVSYQVQATNPELKTARTPSHPAF
TPWWIASYSALQQKGVNAPETPQAEIETEEHQPIRTALIHGTPEVGSLHAFPKGPNPGTF
LHGVLETLANEGFDNASRDPELTQRMLQRCAQRGWEAHAPALKAGITAWLHTPLAPENEE
GPLLASLTHYRAEPDFWFATVNAKTPVLDKLVKETLFPGEPRPALGFQQLNGLMKGFIDL
LAEHNGQYYVIDWKSNWLGPSDAAYTEDALTRATLDKRYDMQLCIYLLALHRHLRQTLPD
YDYDHHIGGAMLVFLRGIQAPSRGVLRFKPPLAFIERLDDLMAGENHKEVTV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgctcccttccactgagtcgtcttctaccccattagccctgggccttcccctg
cgtggtagccaactcattgaagccagtgccggtacgggtaagacctttacgattgcgctc
ttgtacgtgcgcttggtactcggccacggacagcccgatgatgacagccattccttcact
aatggcttcacgatgccgctggtgccgccggatattttggtcgtcacctttacagaagcc
gctagccaagagctgaaagaccgcatccgtgcccgcttggtgcaagccgcagaggcgttt
agggcaacagagggtgacgatggcttgcatcaaagcgaccccctgctggcgcagctgcgc
gacgattatcctcgcgcccattggccgctctgcgcccgcaggttagaagtggccgccgag
tggatggatgacgccgctatttctaccatccacagctgggcgcagcggatgctcaaggag
catgccttcgatagcgggaaactgtttcatcaagagatagtgaaagacctcacctcctta
acgcaggaggccgtatttgattattggcggacacgcatttaccccatggacgctcctatg
gcaggagtgatgatggagttattcgcatcgccaatagcgctacatggcgctttacgcact
ttattacagcgtcatgatgttcaactctgctttgcaggcgcgccgttacccaaaaaagac
ctgcaggcacagctacgggggctgcttcccgctcgtgaagcgctaaatgaggctgaagac
aaggcacggcaggcttattgccaggatgcagaagcgatacaccaagcgctgcatggcctt
cgcagcaagctcaatggcaataagtttcggggcaaaaacgatgacacaacgtttgccagc
tggttagcagagctcaacgactgggggcggggaaagcgttgcctggctgcgtgtaagttt
gttcctaaactcgccaccagccagctgttagtgaataaaggcaccacgctacccaccttt
gagattcatgaggcgttagaggcatggcatgagctgtccaccagtcttcacactcaagcc
aaagaactgaagccgctggtactggccgacgcacgcgagtgggtctccaaccgagtaaac
aagcagctatcacaacgtgctgagatggggtttgacggtatgatccagggccttgctgat
gccctaagcggcaaaggcggcgatgcactggcacacaggctacgcacgcagtttcccgtg
gcgatgatcgatgagttccaagataccgatcctgcgcaataccgtatttttgatgcgatc
tatcaggtgcaagagagcgacccctcgtcggcactgatcctgattggcgatcccaaacaa
gccatttacggctttcgcggtggcgatatctatacgtacttaaaggcgcgtgctgccaca
tctccacgtcatcacaccctggcaacgaacttccgttcaagcgcgaacgtagtggcctcg
gtaaatcaacttttccggcatgccgaaaatgcgtttactcgaaaagccttcaggtttgcc
aacgaaacaacccaagaaaaccccatgccgtttacaccggcaggcgcgaatggccgaaaa
gaagcgctagtgctgaatagcaagccgacagcggcgctaacagcgtggtgggtgggtgaa
gatgacgaaccggtgaataagaagcgctaccttgcgcaggccgcacgccactgcgcgaat
caaatcgccagctggcttaacggcgctgcctcaaacgcctcaggctttgaaaacactacc
ggccaagcgtttcgaccacttcaggcgagcgacattgctattttggtgcgcgaccgcaca
gaggcagctgctatccgttcggcattgagcgaacgtcagttagccagcgtgtatctatct
gaccgcgacagcgtatttgctaccccagaagcgaaagattgctggcgctggcttaaggct
attgcccatcctgaagaggtctcgacactacgcgcagcacttgccacgcccacgctgggg
atgagccttgctcaactggatgaacttcaccataacgagctcgcttgggaggcaacgcaa
gaacgttttgctgagtatcgcgcacgctggcatcgccagggcgtactgcctgctttacgt
cagctgatgcacgattatcgtgtgccagagcagctgctcgctaaaccccaaggggagcgc
tgcttaactaacctgttgcaccttgcggaatgggcccaacaggcgagcgataccttagac
ggtgaccatgcgctgattcgcgttctcggtgaacatattcaagacccaaaacgcgatgag
caaatcctgcgcctagaaagcgatgccgacctgatccaggtggtgaccatcttcaaatcg
aaaggactggagtacccgattgtcgccctgccctttatcgcgacgtttaaagaaattaac
gggaaatggggcacacctctgttccacgatgaaggcggcaacgcgtttttagagctagcc
aatagtaaagatgaggcgaaagagggctttgaagcggctaatgatgagcggctttctgaa
gatatgcgcctgctgtatgtcgcgctaacccgcgcgcgccacgcgacgtttatcgggtta
gcccccctgaaacatggtagtagcaaaaaagctcaaatcgataaatccggtattggctac
ttattaggtggtgggaaggtattgcccgacctggggtcgattaaaaacgcgtggcaggta
cactcagaagcctgcgctcatattacctcccatcccgccacgagcgaggaggttagctac
caagtacaggcgaccaaccctgagttaaagaccgcacgaacaccgagccacccagcgttc
accccatggtggattgccagctactcggctctgcagcaaaaaggtgtgaatgcccctgaa
acgcctcaggcagaaattgaaacggaagagcaccagccgatacgcaccgcccttatccat
ggcacgcctgaagtgggctcgctgcatgcgtttcctaaaggccctaaccccggcaccttt
ttgcacggcgtattagaaacgctggcgaacgaaggttttgataacgctagccgtgaccca
gagcttactcagcgtatgctgcagcgctgcgctcaacgaggttgggaagcacatgcacct
gccttaaaagccggtatcacggcttggttacataccccactagcaccggaaaacgaggaa
ggtccgttgttggcatcgctcacccattaccgcgctgaacctgatttttggtttgcgacg
gtcaatgccaagaccccggtactcgataagctagtgaaggagacgctgtttccaggagag
ccacggccagcgctgggctttcaacagctcaacggtttgatgaaaggttttatcgaccta
ctcgcagagcacaacggccagtattacgtgattgattggaagtcgaactggctggggcct
tctgatgcggcttacaccgaggatgcacttactcgggcaaccttggataagcgctacgac
atgcagctgtgtatttacttgctggcactgcatcgccatctgcgccaaaccctacccgac
tacgactatgaccaccatattggcggtgccatgctggtctttctgcggggcatacaagcg
cctagccgtggcgttctgcgttttaagccaccccttgcgtttatcgagcgcttggatgac
ctgatggctggagaaaatcacaaggaggtgacggtatga
DBGET
integrated database retrieval system
