Halomonas sp. A3H3: HALA3H3_260025
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Entry
HALA3H3_260025 CDS
T10226
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALA3H3_260025 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_260025 (recD)
Enzymes [BR:
haah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HALA3H3_260025 (recD)
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HALA3H3_260025 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
PhoH
AAA_16
TraI_hel_assoc_N
AAA_5
AAA_28
AAA_25
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CDG51739
LinkDB
All DBs
Position
hala3h3:1290655..1292703
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AA seq
682 aa
AA seq
DB search
MNTLHLSDNETLLTTLFDWARAGWIRDLDAAFADQLARLAPEADGPCLLAAAMVSHLAGQ
GHLLLDLKTLTTQPRSLIAVQAQEAMPELPTPDSFIAQYADTGWEEALRAWSAVGTGTNG
NEPLVLVGSTLYLRRYWQHEQRITAAVNARLEHVTDWPSDQAAGLLSRLFPPHADDVRWQ
KMACAIGARAPFAVITGGPGTGKTTTVIRLLALLQGLTRLANQPALTIALAAPTGKAAAR
LNESIAQQVAALNDIELPDGTQQSVPTEVKTLHRLLGARPDTRHYAYHAHRPLPYDMVVV
DEASMVDIEMMAALLDALPSHARLVLIGDKDQLASVEAGAVLGSLCQRADEGHYSDPTAQ
WITATTGYTLDASLTNPSGQALDQAVAKLRHSFRFDSQSGIGHLADAINAGNAKQAHSVL
ADTRYQDLAHLSLSATAPYHKLTTLAVAGRKNNPHARGLSHYLHCIQQTGNRPDLEDDKA
IWDDWAATILKAHSTFQLLTPLRQGPWGVETLNERIEQALIREGWIDASAAESHWYEGRP
VLVTGNDYGLKLMNGDIGITLNAPRHFKTSTKTVPKEENGLTLRVAFPDGQGGIRWVLPS
RLQRIETVYAMTVHKSQGSEFSHTALVMPDSLSPILTRELIYTAVTRAKHTFTLLDTHSE
VLTRAIERRIERYSRLFAVSDQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctgcacttatcggataacgagaccttactgaccacacttttcgactgggca
cgcgcggggtggattcgcgacctggacgcagcgttcgctgaccagctagcacggcttgca
ccagaggccgatggcccctgcttgctagcggcggcgatggtcagccatttagccgggcaa
gggcatctcttgctcgatcttaagacattaaccacacagccccgctcgctgatcgctgta
caagctcaggaggccatgcccgagctgcccacacccgactccttcattgcccaatatgca
gacaccggctgggaagaagcattacgggcttggtcggctgtgggcacaggcactaacggc
aatgaacctcttgtgctggtcggctccacgctctatctgcgccgctattggcagcacgag
cagcgcatcaccgcggcagtgaacgcgcgccttgaacacgtgaccgattggcccagcgat
caggctgccggcctgctgagccgtctgtttccgcctcatgcggacgatgtacggtggcaa
aaaatggcgtgtgcgattggcgcacgcgccccctttgcggtgattaccggtggccctggc
acaggaaaaaccaccacggtcattcgcctgctggcgcttctgcaaggtctaacgcgtctc
gctaatcagcccgcgctgacgattgcgctggcggcaccgacgggtaaggcagctgctcgg
ctcaacgaatcgattgcccaacaggtggctgcgctgaacgatattgagctccctgacggc
acacagcagtccgtgcccacggaggtgaaaacactgcaccgcttactaggtgcccgccca
gatacgcgccactatgcctatcatgctcaccgcccgctgccttatgacatggtggtggtg
gacgaagcctctatggtggatatcgagatgatggcagcactactggacgcgctgccctct
cacgctcgactggtgttaattggcgataaagatcagctggcttcagtcgaagccggagcc
gtattaggcagtttgtgccaacgcgctgatgaggggcattacagcgaccctaccgctcaa
tggatcacagccaccacgggatacacactcgacgcttccctgacgaacccttcaggccag
gcgctggatcaggcggtcgccaagctgcgccatagctttcgctttgatagccaaagtggc
atcgggcacctcgccgacgccatcaacgcaggcaatgccaagcaggcgcactccgtactg
gcagacacccgctatcaagatcttgcccacctatcgctgtcagcaaccgcgccttaccac
aagctaacgacattagccgtcgcaggacgaaaaaataatcctcacgcacgcggtcttagc
cactacttgcactgtattcagcaaacaggcaaccgtcctgacctagaggacgacaaagcc
atctgggacgactgggcagccactattctcaaggcccacagcacgttccagctattaaca
ccgctgcgccaggggccgtggggagtagaaacgctcaatgagcgtattgagcaggcactg
atacgtgaaggatggattgatgcctcagcggctgaaagccactggtatgaaggccgcccc
gtgttagtcaccggtaacgactacggcttaaaactgatgaatggggatatcggcattacc
ctgaatgcaccgcgtcactttaagaccagtactaaaacagtacccaaagaggagaacggg
ttaacgctgcgtgtggcgttccccgatggccaaggcggtattcgctgggtgctgcctagc
cgtttgcagcgcattgaaacggtctacgctatgaccgttcacaagtcgcagggctcggag
tttagccataccgcgctggtgatgcctgattcactctcgccgatactcacccgagaattg
atttataccgccgtgacgcgggctaagcatacgtttacgttactcgacacccacagtgag
gtactaacacgcgcgattgaacgccgcatagagcgctacagccgcctatttgccgtctca
gaccaataa
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