Halomonas sp. A3H3: HALA3H3_340089
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Entry
HALA3H3_340089 CDS
T10226
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
haah Halomonas sp. A3H3
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_340089 (phrB)
Enzymes [BR:
haah01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HALA3H3_340089 (phrB)
DNA repair and recombination proteins [BR:
haah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HALA3H3_340089 (phrB)
Prokaryotic type
HALA3H3_340089 (phrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CDG52395
LinkDB
All DBs
Position
hala3h3:1614835..1616262
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AA seq
475 aa
AA seq
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MTGKPIKHQLIWLRSDLRIDDNSALAAAAVKGPVIAVFLRSIPQWQAHGHGANKLDFWAR
GVASVKTALNGLNIPLLHRDIERYDQAPEVLLEIAREYDVEQLHFNHEYALNERHRDQAV
QDAFKQAGITAHGYHDAIAFAPGSLLTGKGDYYGVLTPFSKAWHKQVSADQLALRATPQV
QAALDIQSDLLPELPKLDSSPIDGQLWPAGENAAADNLARFLRFRGRHYNAQRDLPKVRG
TSELSPYLALGMISHRQCLQAVMSENGGHLADGDIGLTTWVNELVWREFYQHVAVGFPQV
CRYQPFQEHTKQLAWRDDDEGFQAWCEGRTGYPIVDAAMRQLVNTGWMHNRLRMITAMFL
SKHLLIDWRRGEAFFMRHLIDGEFCANNGGWQWAASTGTDAAPYFRIFNPTTQSTRFDAD
GEFIAHWLPELAKLPAKARHAPPQDLLSDVDYPAPIVDHKAARQRALEAFKSLSK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaaagcctataaagcatcagttgatatggctgcgcagcgacctgcgtattgac
gacaacagtgccctcgccgccgccgcggttaagggccctgtgatagcggtgtttttgcgc
agcattcctcagtggcaagcgcatggccacggcgctaataagctggatttttgggcgcgc
ggcgtcgctagcgtcaaaacggcgcttaacggtttgaatattccgctgctgcatcgcgat
attgaacgttatgaccaggcacccgaggtgctgcttgagatcgctcgcgaatatgatgtt
gagcagttgcacttcaatcacgagtacgcgctcaatgagcgccaccgcgaccaggctgtg
caagacgccttcaaacaggccgggattaccgcacatggctaccacgatgccatagcgttt
gcccccggcagcctgctaaccgggaagggcgactactacggggtattgacaccgttctcc
aaggcgtggcacaagcaggtcagcgctgatcagttggcgctgcgcgcgacgccacaggta
caagcggcgctggatattcaaagcgacctgctgcctgaacttcccaagcttgatagctcc
cctatcgatgggcagctgtggccagccggtgaaaatgccgcggcggataacttagcgcgc
ttcctacgctttcgtggtcgtcactataacgcccagcgcgacctaccgaaggtgcgcggc
accagtgaactgtcgccctatctagcgctaggcatgatctcccatcgccaatgtttacaa
gcggtgatgagcgaaaacggcggtcacttagccgatggcgatatcggccttactacctgg
gtcaacgagctggtctggcgagaattttatcagcacgtagcggtgggttttccacaggtg
tgccgctaccagccctttcaggagcataccaagcaactagcttggcgtgacgatgacgaa
ggctttcaggcttggtgcgaggggcgtacgggatatcccattgttgatgccgccatgcgc
caattagtgaacaccggctggatgcataaccgactgcgcatgatcacggcgatgttttta
agcaaacatctactgattgattggcgacgcggtgaagccttttttatgcgccacttgatt
gacggtgaattctgcgccaataacggcggctggcaatgggcggcctctacgggtactgat
gctgcgccctacttccgtattttcaatcccaccacccaatccacccgttttgatgcggac
ggtgagtttattgcccactggctgcctgagcttgccaaactacccgccaaagcgcgccac
gcgccacctcaggatctgcttagcgacgtcgattatccagcgcctattgtcgatcacaag
gcagcacgtcagcgcgccttagaggcatttaaatcgctctctaaataa
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