Halomonas sp. A3H3: HALA3H3_340114
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Entry
HALA3H3_340114 CDS
T10226
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
haah Halomonas sp. A3H3
Pathway
haah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HALA3H3_340114 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_340114 (uvrA)
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HALA3H3_340114 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HALA3H3_340114 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_22
AAA_23
AAA_21
Viral_helicase1
Zn_ribbon_FGT1_2
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
CDG52420
LinkDB
All DBs
Position
hala3h3:1660451..1663297
Genome browser
AA seq
948 aa
AA seq
DB search
MDSILVRGARTHNLKQIDVELPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGTPRC
PEHGEDLEAQTISQMVDQVMNLAEGTKLMLLAPVVKGRKGEHLQLLAELRAQGFVRALVD
GQVLELDDIAPLDKRKKHDISVVVDRFKVRDDLAQRLAESFETALNLADGTAMIHFMDGE
RDDIAFSSRFACPVCGYSLAELEPRMFSFNNPAGACPTCDGLGVQQYFDPDKLISHPELS
LAEGVIKGWDRRNIYYFTQLQALAKHYGFELETPWQELARHEREVILNGSGDEQIPFVYV
GDRGRKVTREHAFEGVLPNMQRRYRETESNMVRDDLVKYIAVQPCATCNGSRLRKESRHV
YVDDHNIAEIVRFPIGEAWRYFADLSLPGRKGEIADKIVHEIHARLEFLVNVGLDYLNLE
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLKTLERLRDLGNTV
IVVEHDEDAIRAADHVLDIGPGAGVHGGEIVAQGTPQDVMDNHNSLTGQYLSGSREIAVP
PYRIPGNPEKQLIVRGATGNNLQNVTLSLPLGLFIAITGVSGSGKSTLINGTLMPIAARE
LNRATTLTAAPYEKIEGLDQLDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQEA
RSRGYKPGRFSFNVKGGRCEACQGEGMIKVEMHFLPDIYVPCDVCKGKRYNRETLDIHYK
GKTIHEVLAMTVEDALEFFSPVPAIARRLQTLLDVGLSYIRLGQSATTLSGGEAQRVKLA
RELAKRDTGKTLYILDEPTTGLHFEDIRQLLTVLHRLRDHGNTIVVIEHNLDVIKTADWI
VDLGPEGGSGGGQIIAEGTPEQLAKQDVSHTGRFLAPLLARGKRATKR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggacagcattctggtcaggggtgcccgcacccacaacctcaagcagatcgatgtggag
ctgccccgtaacaagctgattgtgattaccggcctctccggctcgggtaaatcgtcgtta
gcattcgacaccctttacgccgaggggcagcgccgctacgtggaatcgctctccacttat
gcgcgccagttcctgtcgatgatggaaaagcccgatgtggatcacatcgaagggctgtca
cctgcgatctccattgagcagaagtccacttcccacaacccgcgctcgaccgtgggcacc
atcaccgaaatttacgactacctgcgtctgctgtttgcccgtgccgggacgccccgctgc
ccagaacatggcgaagacttggaagcccagaccatctcgcagatggtcgaccaagtcatg
aacctcgccgaaggcaccaagctgatgctgctggcgccggtagtcaaaggccgcaaaggc
gaacatttacagttattagccgagctgcgcgcccagggcttcgtacgcgccctggtcgat
ggccaagtgctggaactggacgacatcgcaccactggataagcgcaaaaagcacgatatc
agcgtcgtcgttgaccgcttcaaagtgcgcgacgaccttgcccaacgtttggcggagtcc
tttgaaaccgcgctgaacctcgccgacggcaccgccatgattcactttatggacggtgaa
cgcgacgatattgccttttcatcgcgctttgcctgcccggtgtgcggctactcgctggcg
gaacttgagccacgcatgttctcgttcaacaatcctgcgggcgcctgccctacctgcgac
gggctaggcgtacagcagtacttcgacccggacaagctcatcagccacccggagctatcg
cttgccgaaggcgtgatcaaaggctgggatcggcgcaatatttactacttcacccagctc
caggcactggccaagcactacggctttgagctggaaacgccctggcaagagctcgcccgc
cacgagcgggaggttatcttaaacggcagcggcgacgaacagataccgtttgtgtacgtg
ggtgatcgcggccgtaaagtgacccgcgaacacgctttcgagggcgtactgcccaatatg
cagcgccgctatcgggaaaccgaatccaatatggtgcgcgatgacctggtcaaatacatc
gccgtacagccctgcgccacctgtaatggctcgcgcctgcgtaaagagtcacgccatgtt
tacgtggatgatcacaatatcgccgagattgtgcgctttccgattggtgaggcgtggcgc
tactttgccgacctaagcctgccaggacgcaaaggtgagatcgccgataaaatcgtccat
gagattcacgcccggctagagtttctggtcaacgtggggctggactatctcaacctggag
cgcagtgccgataccctttccggcggtgaagcccagcgtatccgtttagccagccaaatc
ggcgcaggcctggtcggggtcatgtatattctcgatgagccgtcgattggcttgcatcag
cgcgacaacgaccgactgctgaaaacccttgagcgactgcgtgacttaggcaataccgtg
attgtggtagagcacgatgaagacgctattcgcgccgccgaccacgtgctggatatcggc
ccaggtgcgggtgtgcacggcggtgaaatcgttgcccagggcaccccgcaagacgtgatg
gacaaccacaactcgctgaccggccaatacttatctggctcccgggaaattgccgtgccg
ccctaccgcatacccggcaatccagaaaagcagctgattgtgcgcggcgctaccggcaat
aacctgcagaacgtcacccttagcctgccgctggggctgtttatcgccatcaccggcgtt
tccggctcaggtaaatcgacgttgatcaacggcaccttgatgccgattgcggcgcgcgaa
ttaaatcgcgcgacaacattgaccgccgcgccctatgagaagatcgaggggctcgaccag
cttgataaagtcatcgatatcgaccagagcccgattggtcgcacgccacgctccaacccg
gccacctatacgggtatttttacgccgattcgcgagctgtttgcgggcacccaagaagcg
cgttcccggggctataagcccggtcgttttagttttaacgtcaagggtgggcgctgcgag
gcgtgccagggcgaaggcatgatcaaggtagagatgcactttctgccggatatctacgtg
ccctgcgatgtctgtaagggcaaacgctacaaccgcgaaaccctggacattcattacaag
ggtaaaaccatccacgaagtgctggccatgacggtggaagacgccctggagttctttagc
ccagtgcccgccattgcacgtcgcctgcaaaccttgctagatgtaggcctttcctacatt
cgcttagggcagagcgccaccaccctttccggtggcgaagcgcagcgggttaaactcgcc
cgtgaattggccaagcgtgataccggcaaaacgctgtatatcttggatgagcccaccacc
ggcctgcactttgaggatattcgccaactgctgacggtacttcaccgtctgcgcgatcac
ggcaataccatcgtggtgattgagcacaacctggatgtgatcaaaaccgccgactggatt
gtcgatcttggccccgaagggggttcaggtggcggacagatcatcgccgagggcacgccg
gaacagctcgccaaacaggacgtttcgcataccggccgcttcttagcgccgctgctcgcg
cgaggcaagcgtgcaacgaagcgttga
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integrated database retrieval system
