Halomonas sp. A3H3: HALA3H3_390019
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Entry
HALA3H3_390019 CDS
T10226
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
haah Halomonas sp. A3H3
Pathway
haah00300
Lysine biosynthesis
haah00470
D-Amino acid metabolism
haah01100
Metabolic pathways
haah01110
Biosynthesis of secondary metabolites
haah01120
Microbial metabolism in diverse environments
haah01230
Biosynthesis of amino acids
Module
haah_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HALA3H3_390019 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HALA3H3_390019 (dapF)
Enzymes [BR:
haah01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HALA3H3_390019 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CDG52770
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All DBs
Position
hala3h3:2024062..2024895
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AA seq
277 aa
AA seq
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MLLHFTKMHGLGNDFVMVDLVTQRARLDEAQIRALADRRFGIGFDQLLLVEPPRDPEMDF
RYRIYNADGSEVENCGNGARCFARFVRDQRLTHKHEIHVETAGGPLVLTVQHDGMVRVDM
GRPRFSPLALPFDAPGDQPLHQLQVGDETLQIGVVSMGNPHAVMQVENVDSAPVERLGPL
VEAHPRFPKRVNVGFMQVLSPSEIRLRVYERGSGETLACGTGACAAVASGIRQGLLKSPV
KVHLPGGELSIEWPDPEGALTMVGPATRVFDGRVALN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacacttcaccaaaatgcatggcctgggtaatgactttgtcatggtggatcta
gtcactcagcgcgcccggttggacgaagctcagattcgtgcactggcagaccggcgtttc
ggcattggctttgatcagttgttgctcgtcgaaccgccccgggatccagagatggatttt
cgctaccgcatttacaatgctgacggcagtgaagtggaaaattgtggcaacggtgcacgc
tgctttgcccgcttcgtgcgcgatcagcgattgacccacaagcatgaaatccacgtagaa
accgccgggggcccgttggtgctgaccgtgcagcacgacggtatggtgcgagtggatatg
ggccgcccgcggtttagccctttggcgctgccgttcgatgcccctggggatcaacccctg
catcagttacaagtgggtgatgaaacgctgcagatcggcgtggtctctatgggaaaccca
catgctgtgatgcaggttgagaacgttgatagcgccccggtggagcgcctcgggccgttg
gtagaggcgcatccgcgttttcccaagcgtgttaacgtgggctttatgcaggtactctcg
cccagtgaaattcgtttgcgtgtgtatgagcgcggcagtggcgaaacgctggcctgcggt
accggtgcctgcgctgcagtggccagcggtattcgccaggggctgctaaaaagccccgta
aaagtccatttacccggtggagagctcagcattgagtggcctgaccctgaaggggcgcta
acgatggtggggccagctacacgcgtcttcgatggccgcgtagcacttaattaa
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