Halomonas sp. A3H3: HALA3H3_510077
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Entry
HALA3H3_510077 CDS
T10226
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HALA3H3_510077 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haah03019
]
HALA3H3_510077 (recQ)
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_510077 (recQ)
Enzymes [BR:
haah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HALA3H3_510077 (recQ)
Messenger RNA biogenesis [BR:
haah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HALA3H3_510077 (recQ)
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HALA3H3_510077 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
CDG53473
LinkDB
All DBs
Position
hala3h3:complement(2742624..2744462)
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AA seq
612 aa
AA seq
DB search
MHGDPHPAALKVLQEVFGYDSFRGPQQAIIEHVMAGGDALVLMPTGGGKSLCYQIPALLR
EGTAIVVSPLIALMQDQVAALEQNGVRAAYLNSSLDYHEAVEVENRLRSGELDLLYVAPE
RLATARMQMLLEQTRIALFAIDEAHCVSQWGHDFRPEYRQLSQLHQRFPQVPRIALTATA
DVPTRGDIMEHLQLQEAALYNSGFDRPNIRYHIAENQGNAKEQLLRFIREHHDGEAGIVY
CLSRRKVEETAAWLERQGLTALPYHAGLPPEQRQQHQTRFLREDGVVVVATIAFGMGIDK
PDVRFVAHLNLPKSIEAYYQETGRAGRDGLPADAWMAYGLQDVITLRQMQQNSSAADHQK
RIEQQKLDAMLGLCEIISCRRQALLHYFGDHLDAPCGNCDNCLTPPETWEATVAAQKALS
CVYRTEQRFGVTYLVDVLLGKSNERITRFGHDRLSTYGIGKDLSANEWKALFRQMIASGF
LSVDMEGHGGIKLTANAKPVLRGEQTLTLRKPSNKPSKAKTARRGSKSTSAPQGHGPLWE
ALRRHRREMAEAQGVPAYVIFHDATLAEMVEQKPQSLAALGAISGIGARKLEDYGEGFLD
VILAHQESKQNS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgaccctcacccggcagccctcaaggtgttgcaggaagtatttggttacgac
agctttcgcggcccacagcaggccatcatcgagcatgtaatggccggtggcgatgcgctg
gtgctgatgcctaccggcggaggcaagtcactgtgctatcagatccctgcactgctgcgc
gaaggcaccgcgattgtggtctcgccgctgatcgcgctgatgcaggatcaggtggcggcg
cttgagcagaacggggtcagggcggcttacctgaactccagcctcgattatcacgaggcg
gtcgaggtggagaaccgcctgcggtcgggcgagctggatctgttatatgtcgcgcccgag
cgactggccactgcgcgtatgcagatgctgctggagcagacccggattgcgctgttcgcc
attgatgaagcccactgcgtctcccagtggggccacgattttcgtcctgagtatcgccag
ctctcccagcttcatcagcgctttccccaggtgccccgcatcgccctcaccgccactgcc
gatgtgcccacccggggcgatatcatggagcatctgcagctccaggaggcggcactttac
aacagcggctttgaccggcccaacattcgctaccatatcgccgaaaatcagggtaacgcc
aaggaacagctgctgcgctttattcgcgagcaccacgacggcgaggcgggtatcgtctac
tgcctttcccggcgcaaggtggaggagaccgccgcctggctggaacgccaggggctgacg
gcactgccctaccacgcggggcttccccccgagcagcgccagcagcatcagacccgcttt
ttgcgtgaagatggtgtcgtggtagtggccaccatcgcctttggcatgggcatcgacaag
cccgacgtgcgctttgtagcccacctcaacctgcccaagagtatcgaagcctactaccaa
gagaccggccgcgccgggcgtgacggcctgcccgccgatgcctggatggcctatggactt
caggatgtgatcacgctgcgccagatgcagcagaactccagcgccgccgaccatcaaaag
cgcatcgaacaacagaagctcgacgccatgctcgggctgtgtgaaatcatcagctgccgc
cgccaggcactgttgcactattttggcgatcatctggacgccccctgcggcaactgcgac
aactgcctgaccccacccgagacctgggaggccaccgtggcggcgcaaaaggcgctctcc
tgtgtctaccgcactgagcagcgcttcggcgtgacctaccttgtggatgtgctgctaggt
aaaagcaacgagcgcatcacccgctttggtcacgacagactcagcacctacggcataggc
aaagacctctccgccaacgaatggaaggcgctctttcgccagatgattgccagcggcttt
ttgagcgtggatatggagggccacggcggcattaagctcactgccaatgccaagccggtg
ctgcgcggcgagcagactctaactctgcgcaagccaagcaacaaacccagcaaagccaaa
accgctcgacggggaagcaaaagcacctctgctccgcagggccacggcccgctgtgggaa
gccctgcgtcggcaccgccgggaaatggccgaagcccagggcgtgccagcctatgtgatc
ttccacgacgccaccctggccgaaatggtcgaacagaaaccccagagtctggcggcactg
ggcgcgatctcgggtattggtgcacgtaagttggaagattatggagagggttttctggac
gtcatcttggcgcatcaggaatccaagcaaaacagctga
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