Halomonas sp. A3H3: HALA3H3_580033
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Entry
HALA3H3_580033 CDS
T10226
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03030
DNA replication
haah03410
Base excision repair
haah03420
Nucleotide excision repair
haah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HALA3H3_580033 (polA)
03410 Base excision repair
HALA3H3_580033 (polA)
03420 Nucleotide excision repair
HALA3H3_580033 (polA)
03440 Homologous recombination
HALA3H3_580033 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haah03032
]
HALA3H3_580033 (polA)
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_580033 (polA)
Enzymes [BR:
haah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HALA3H3_580033 (polA)
DNA replication proteins [BR:
haah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HALA3H3_580033 (polA)
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HALA3H3_580033 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HALA3H3_580033 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
CDG53661
LinkDB
All DBs
Position
hala3h3:2965215..2968004
Genome browser
AA seq
929 aa
AA seq
DB search
MARAPIVLVDGSSYLYRAFHALPPLTTSNGQPTGAVKGVLNMLKRLIKDYPESPMAVVFD
APGKTFRDELYSDYKAHRPPMPDDLRSQIAPLHACVKALGLPLLCVDGVEADDVIGTLAH
HATQAGRDAVISTGDKDMAQLVNAHITLVNTMKDETLDEAGVEEKFGLPPALIIDFLALM
GDKVDNIPGVPGVGEKTAIGLLQGMGGGLETIYGDLERVKTLTFRGAKTLPKKLEEHRDQ
AFLSYQLATIKVDCELPVGLDDLDIAHPDREALVTLYKEMEFRQWLGELLEGKDEGVDDV
KGGEPAPVSAEEGGSESEGASTSVQASVREDQVILEQADFERWLDRLQNAERFCFDLETT
SLNYMDAEIVGVGLSLEVGEAAYIPLAHDYLDAPKQLDRKTVLAALKPLLEDPTKTKIGQ
NLKYDISVLANYAISVAGPFADTMLASYVLNSTATRHDMDSLALKYLGEKTISFEEIAGK
GAKQLTFNQIALEQAAPYACEDVDITLRLQQALRPQVESEGRLAEVLDNIELPLIKVLSR
IERNGVAVDAELLHKQSQQLEQRIGELEREAFELAGREFNLGSPKQLGQILFEEQKIPVL
KKTPKGAPSTAEGVLEELALDYPLPKVIMQHRGLAKLKSTYTDKLPRLLNKATGRVHTSY
HQAVTATGRLSSSDPNLQNIPIRTEEGRKIRQAFIARPGYRIVAADYSQIELRIMAHLSE
DKGLLEAFAEGRDIHTATAAEVFGTSLEKVSGDQRRSAKAINFGLIYGMSAWGLSRQLHI
ERNQAQTYIDRYFDRYPGVARYMERIRSQAAEDGFVETVLGRRLYLPEIQSQNRNRRQGA
ERTAINAPMQGTAADIIKQAMIDVDAWLAEGEFDALMVMQVHDELVFEVAEKQVEAFIEQ
VQKRMQGAAELKVPLIVEAESGANWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgctccgatcgtcctcgtcgatggctcttcctatctgtaccgtgcctttcat
gcgctgccgccgctaacgacctccaatggtcagccaacgggcgcggtgaaaggcgtgtta
aacatgctcaaacggctgattaaggattaccccgaaagccccatggcggtggtgtttgac
gcgccgggcaaaaccttccgcgatgagctgtacagcgactataaagcgcaccgcccgccg
atgcccgatgacctacgcagccagatcgctccgctgcacgcctgcgtgaaggcgctgggc
ctgccgctgctttgcgttgacggcgtagaggcggacgatgtgattggcaccctggcccat
cacgccacccaggcgggccgcgatgcagtgatctccaccggcgataaggatatggcgcaa
ctggttaatgcccatatcactctggtgaacaccatgaaggatgaaaccctggatgaggcg
ggcgtagaagaaaaattcggcctgccgcccgcattgattatcgattttctcgctctgatg
ggtgacaaggtcgataacattcccggtgtgcccggcgtgggtgagaagaccgctattggc
ctgctgcaaggcatgggcggcgggctggagaccatttatggcgacttagaacgagtgaaa
acgctcactttccggggcgccaaaactctgcccaagaagcttgaagagcatcgcgatcag
gcgtttctctcctatcagctggccaccattaaagtcgactgcgagttgccggtgggcttg
gatgatttggatattgctcatccggatcgcgaagcgctggtcaccctgtataaagagatg
gaattccgccagtggctgggcgagctgctggaaggcaaagacgaaggcgtggatgacgtt
aaaggcggcgagcctgcgcccgtaagcgctgaagaaggtggtagcgagtccgagggggcg
agcacttctgtgcaagcctctgttcgtgaagatcaggtcatcctcgaacaggcagacttc
gagcgctggctggatcggctgcaaaacgccgagcgcttctgtttcgatctggaaaccacc
agccttaattacatggatgcggaaattgttggcgttggcttgtcgctggaagtgggtgag
gcggcctatattccgcttgcccacgactacctggatgcgcctaagcagcttgaccgtaaa
acggtgctggcggcgctaaaaccgctgctggaagacccgacaaaaaccaagattggccaa
aacctcaagtacgacatttccgtgttggccaactatgcgatttccgtggcaggccctttt
gctgacaccatgctggcctcctatgtgctcaattccaccgccacccggcacgatatggat
tcgctggcgctcaagtatttgggtgaaaagaccatctcctttgaagagattgccggtaag
ggcgccaagcagttgacctttaaccagattgccctggagcaagcggcgccatacgcctgc
gaagatgtcgatatcaccctgcggctgcagcaagcgctgcgtccccaggtcgagagcgaa
gggcgtctggcggaggtgctggataatattgagctgccgctgatcaaagtgctctcgcgc
atcgagcgaaacggtgtcgccgtggatgctgagctactgcacaaacagagccaacagtta
gagcagcgcattggcgaattagaacgcgaggcgtttgaactggccgggcgcgaatttaat
ctcggttcacccaagcagttagggcagattctgtttgaagagcagaaaattccggtgctc
aagaaaacccctaaaggcgcaccttctaccgcggaaggtgtgctggaagagttggcgctg
gattacccgctgcccaaggtgattatgcagcaccgggggctggccaagctgaagtccacc
tacaccgataagctaccgcgtttgctcaataaagccactggccgggtacacaccagctat
catcaggcggtcactgcgaccgggcggctgtcgtcgtcggatcccaacttacagaacatt
cccatccgtaccgaagaggggcgcaaaattcgtcaggcgtttattgcccgccctggctac
cgtattgttgccgccgattactcgcaaattgagctgcgcattatggcgcatttatctgaa
gataaagggctgctggaagcgtttgccgaagggcgtgatattcacaccgccacggcggca
gaagtcttcggcacctctcttgagaaggtctctggcgatcagcgccgcagcgccaaagcg
attaacttcggcttgatctacggcatgagtgcctgggggttgtcgcgtcagttgcatatc
gagcgcaaccaggcgcaaacctacattgatcgttactttgaccgctatcctggcgtggcc
cgttatatggagcgtattcgctcccaggcagctgaagatggctttgtcgaaaccgtgctg
ggtcggcggctctacctaccggaaattcagtcgcaaaaccgcaaccgccgccaaggcgct
gagcgcaccgcgattaacgcgccgatgcagggcactgccgccgatattatcaagcaggcg
atgatcgatgtggatgcgtggttagcggaaggcgagttcgatgcgctgatggtgatgcag
gtgcacgatgaactggtgtttgaagtcgccgagaagcaggtcgaggcctttatcgagcag
gtgcaaaaacgcatgcagggcgcggctgagctgaaagtaccgctgattgtagaagcggag
agcggtgccaattgggatgaagcgcactaa
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