Halomonas sp. A3H3: HALA3H3_590061
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Entry
HALA3H3_590061 CDS
T10226
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALA3H3_590061 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_590061 (priA)
Enzymes [BR:
haah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HALA3H3_590061 (priA)
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HALA3H3_590061 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
HypA
DUF6204
nSTAND3
TrwB_AAD_bind
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
CDG53725
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All DBs
Position
hala3h3:complement(3038490..3040772)
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AA seq
760 aa
AA seq
DB search
MADSFSSQAYSQGQSQRPSQRSSQALDQVLKVALPSPLRRLFDYLPSRETPPCGWQPGLR
VRVPFGRREVVGVVVELADHSDLPRSQLRSISEALDDAPLPEDWLWLCRFAARYYQHSLG
DTLHHAMPARLRQGHPMAGRTQTLWLAQGEGAEEILSRAPKQAELHALLRQHPHGLPGRA
VSAHGFARDQLLALEKKGLASSQEHILTAPTPPSGNLLATPALPLNREQATALATLHEKL
DGYHPCLLEGVTGSGKTEVYLQLIEAVAAKGKQSLVLVPEIGLTPQTLARFRSRFRVPVV
ALHSGLTDPERLDVWEAAASGRALIIIGTRSAIFTPLANPGAIIVDEEHDGSYKQHDGLR
YHARDLAVARAHYHKIPLLMGSATPSLESLHQALSGTYRHLRLTQRPSQHPPAKLELIDL
RHQRRQGGLLPGAIKAIKSTLSTGKQVLIFINRRGFAPTLACHACGWMADCHQCDARMTL
HRQPPLLACHHCDSRRALPDACPECGSGDLRALGSGTERTEETLQTLFPKTTIHRIDRDS
TRRRDSFEQVLKEIQRGEPCVLVGTQMLAKGHHLPHVTLVVVVNADGGLYAADFRALEHS
AQLLEQVAGRAGRAAHPGRVLVQTLHPDDPHLGQLAEHGYGALARNMLEERRISQLPPFC
FMALLRIESPKEEAALAMAQQAAQALRQWLKETGVATRCLGPVPAPMERRQNRYHLHVML
AADKRSQLHPAVSWLVQWLEANREARKVRWSIDIDPQTLA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
ttggctgactctttttcttcgcaggcatattctcaagggcagtctcaaagaccgtcccaa
agatcttcccaagcactcgatcaagtgctcaaggtagcgctgccttcgccgctgcgccgc
ctgttcgactacctgccttccagggaaacgcctccctgcggctggcagccggggctgcga
gtgcgagtgccctttgggcgccgcgaagtcgtcggcgtggtcgtcgaattggctgaccac
agcgaccttccgcgcagccaactgcgtagcatcagcgaagcgctggatgatgccccgttg
ccggaggattggctatggctatgccgttttgccgcccgttattatcagcacagcctaggc
gacaccctgcaccacgccatgcctgcacggctacgccaggggcaccccatggctgggcgc
acccagactctctggcttgcccaaggcgaaggcgcagaagaaatactcagccgagcgccc
aagcaagccgagctgcatgcgctgctgcgccaacaccctcatgggttgcctggccgtgcg
gttagcgcccacggctttgcccgcgaccagctattagcgctggagaagaaaggcctcgca
tccagccaggaacacatcctcactgccccaacgccacccagcggcaacttactggcaaca
ccggccctgccgcttaaccgtgaacaggcgacggcgctagccacactgcatgaaaaactc
gatggctatcacccctgcttactcgagggtgtcaccggcagcggcaaaacagaagtctac
ctgcagcttattgaagccgtcgccgccaaggggaaacagtcgctggtactggtaccggaa
attggcttaaccccacagacactcgcccgctttagaagccgctttcgggtacccgtggtg
gcgctgcattcaggcctcaccgaccccgaacggctagatgtgtgggaagccgccgccagc
ggccgggcgctcattatcatcggtacccgctcggcgattttcaccccgctggccaacccc
ggcgcgattattgtcgatgaagagcacgacggctcctacaagcagcacgacggtttgcgc
taccacgcccgcgacttagccgtggctcgggcccactaccataaaatcccgctgctgatg
ggcagtgccacaccctccctggagagtctgcaccaagcgcttagcggcacctaccgccac
ctacgcctgacccagcgccccagccagcacccgccagccaagctggagctgattgatcta
cgccaccagcgccgccagggcggcctgctgcccggtgccatcaaagcgattaaaagcacc
ttgagcactggcaagcaggtgctgatttttatcaaccggcgcggctttgcaccaacactt
gcctgccacgcctgcggctggatggccgattgccaccagtgcgatgcgcgcatgacgcta
caccgccagccccccctactggcttgccaccactgcgatagccgccgcgccctgccggac
gcctgccccgagtgtggcagcggcgacctgcgcgccttgggtagcggcacagaacgcact
gaagaaacgctgcaaacgctgttcccgaaaaccactatccaccgcatcgatcgcgacagt
actaggcgcagggacagttttgaacaggtactaaaagagattcagcgcggcgaaccctgc
gtgttggtcggtactcagatgctcgccaaagggcaccacctaccccacgtcacacttgtc
gtggtcgtcaatgccgacggcggcctctacgccgctgattttcgcgctctggagcacagc
gcccaactacttgaacaagtagcgggccgtgccggtcgcgccgcccacccaggccgagtg
ctggtgcaaaccctccaccccgacgacccacacttgggccaattggctgaacatggctac
ggggcccttgcgcgcaatatgttggaagaaaggcgcatttcccagctgcccccgttctgt
tttatggcactgctacgcatcgaaagccccaaagaggaggccgctttggccatggcgcaa
caggccgctcaagccctgcgccaatggttaaaagagaccggcgtagccacccgctgcctg
gggcctgtgcccgcgccgatggaaagacgccagaaccgctaccatttacacgttatgctg
gcagccgataaacgcagccaactacacccggccgttagctggctggtgcagtggcttgaa
gccaatcgagaggcccgcaaggtacgctggtcgattgatatcgacccacaaaccctcgct
tag
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integrated database retrieval system
