Halomonas sp. A3H3: HALA3H3_590107
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Entry
HALA3H3_590107 CDS
T10226
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALA3H3_590107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_590107
Enzymes [BR:
haah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HALA3H3_590107
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HALA3H3_590107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
HHH_RecD2
SH3_13
TraI_hel_assoc_N
PIF1
AAA_11
PhoH
AAA_22
UvrD-helicase
SLFN-g3_helicase
nSTAND_NTPase5
T2SSE
AAA
NAT10_TcmA_helicase
nSTAND3
RsgA_GTPase
AAA_16
AAA_28
NTPase_1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CDG53771
LinkDB
All DBs
Position
hala3h3:3096190..3098355
Genome browser
AA seq
721 aa
AA seq
DB search
MNTLCPFDTDFLRVTSIPYATDRYVIFSGVPVRNSSPLVSSVKYVITIKSDLSALPVAPS
IGQHWKVTGSYVIDTLQNGAYSFRRHTYDAPKQLACTLPQDGEQLIQFIAKEEYFKGIGE
QKARLLWHALGEHFHMTVSKDTPESRNKLLKLLSPDSVNALFEGYAKYANLSACNWMSEH
AIPAPVQQRLLKFHHERSIEIIQENPYVLMGFGMSFQEVDSLNFTITDEDPRRLIAAVEM
AIRKDVEKGHTYTTQSRIRPYVSKALGTSKLASRAFEVGHQKAQFVLNQEADTYHPTAQF
LMESVVAKRLRKLAAQIDLYDQDADQACRTSLAEMPYELTQRQVQAIAISLDNAVSCITG
GAGTGKTTVLRTTLSAFKALGYEIHAVALSGRAAMRLQESIGFQTRTIAGLLRQAPVEPT
SAQPLHLLVIDEASMVDLPTMYRLVTHLSPDIRIIFTGDPVQLPPIGCGKVLSDIVASGL
IANTTLDIVKRQVESTGIPEYSQMINEGIVPKQLSMGAVFFHETPQNNIAEQCTALFAEA
PDGSRIVGATKALVADINQRVQAAVNSSGQRMEFELQGDRFFREIRCGDSVLFTENNYDS
GIQNGSLGTLISSESEATGKYFGVVRLDVGSEIVLTQAIQESMELGYCITLHKAQGSQFP
RVIIALRPGRIVDRAWLYTAITRAESEVHIVGTARDLATITHKPSFSHQRLSYLEQLLAK
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgctctgcccatttgatactgatttcttgcgagttactagcattccatatgca
acggatagatatgtcattttcagcggtgtcccagttcgcaactcctctccgttagtcagt
agcgtaaaatacgtcattacgatcaaatccgatttgtcagctctccctgtcgcaccgtca
ataggtcagcattggaaggttactgggtcgtacgtgatcgacactctgcagaatggtgct
tattcgttcagacgccacacctatgatgcgccaaaacagcttgcttgtaccttgccgcaa
gacggcgagcagttgattcaatttatcgctaaagaagaatactttaagggcatcggagag
cagaaagcccgcttgctctggcatgcattgggcgaacactttcatatgaccgtgagcaag
gatacaccagagtctcgaaataaattactgaagctactgagccctgattctgtcaatgca
ctgtttgaaggatatgccaagtatgcaaacctctctgcctgtaattggatgtccgagcac
gccataccggcgccagttcagcaacggcttttaaaatttcatcacgagcgttccattgaa
ataatccaagagaatccctatgtgcttatgggtttcggcatgtccttccaggaagtggac
tctctcaacttcactatcacagatgaagaccctagacgtctgattgctgctgttgagatg
gcgataaggaaggacgtcgaaaaaggccatacctacacgactcaaagccgaattcgcccg
tatgtcagtaaggcgcttggcacttcaaagcttgcgtctcgggcttttgaagtcggtcat
caaaaggcccagttcgtgctgaaccaggaagctgatacctaccatccaacggcgcagttc
ttgatggagtcagttgtagcaaagcgactaagaaagttagctgctcaaatcgatttatat
gaccaggatgccgaccaagcctgcagaacctcattagccgagatgccttatgaattgacg
cagcgtcaagttcaggccattgcgatctctctggataatgctgttagttgcatcacaggc
ggtgcaggaacggggaagaccactgtgctccgcacaacgcttagtgccttcaaagctctc
ggctacgagatacacgccgttgccctatcaggccgggcagcgatgcgcctgcaggagtcg
attggtttccaaacaaggactattgccgggctgctacggcaagcacctgttgagcccact
agtgctcaacctctgcacctgctcgtaatagatgaagccagcatggtcgatttacccacc
atgtatcgtctagtcactcacctcagccctgatattcggatcattttcacgggtgatcct
gttcagttaccaccaattggttgcggtaaagttctttcagatattgttgcatcgggcctg
attgctaacacaacgttagatattgtgaaacgccaagtggagtcgacgggcatccctgaa
tattcgcaaatgattaacgagggtatcgttcctaagcagctgtctatgggtgcagtcttt
tttcacgagacaccccaaaacaacattgccgaacaatgtactgcgctgtttgcagaggct
ccagacggtagccgcatcgtcggcgcaactaaagcgctcgtagctgatattaatcagcgc
gtacaggcagcggtgaattcaagcggacagcgtatggaatttgagctgcaaggtgaccgt
tttttccgcgaaattcgctgtggcgactctgtgttatttacggagaataattacgactca
ggtatccagaatgggtcattgggtactttaatttcgtccgagtccgaggctacaggaaaa
tatttcggcgtggtgcgattggatgtcggcagcgagattgtgttaactcaggctatccag
gaatcaatggagctcggctattgcattacacttcacaaagcacaaggatcgcaatttccg
cgtgtgattattgcccttaggcctgggagaatagtggatagagcatggctttataccgcg
attacacgcgctgagtcggaggtgcatatcgttggcacggctcgtgacttagcaacgatt
actcataaacccagcttttcccaccaaagactgagctatctagaacaacttttggcgaag
gaatga
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