Halomonas sp. A3H3: HALA3H3_670009
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Entry
HALA3H3_670009 CDS
T10226
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
haah Halomonas sp. A3H3
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haah03016
]
HALA3H3_670009 (truD)
Enzymes [BR:
haah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HALA3H3_670009 (truD)
Transfer RNA biogenesis [BR:
haah03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HALA3H3_670009 (truD)
Prokaryotic type
HALA3H3_670009 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CDG54009
LinkDB
All DBs
Position
hala3h3:3310294..3311325
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AA seq
343 aa
AA seq
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MINMPEWQRCLDAQFGSPKPGQYRAQPEDFWVDEQLDFSPEAHGEHLWLRVEKRNQTTLD
VVNTLSRLCGVTPRDIGYSGMKDRIAVTRQWLSVHLPGRDAPTELEQSLNALGITVVEQA
RHPRKLKRGVHRTNRFVLRLSGEAIESEDFVSRWEALCQHGVPNYFGPQRFGPEGRNLQR
AEALLNRGWRKRDDRQGMMLSTARSFLFNELLSARIADGTWSQPLAGDTLMLDGTQSVFR
IDASDHTLQARAAELDVHPTGVLWGVGEADQGDAAGYEARLLEHYPGLCSGLQRSGVKQA
RRALRMRLLEPQYAWESGAARLSFSLPRGSFATAVLGELMLAN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattaatatgcctgagtggcagcgctgtctcgatgctcaatttggctctcccaaaccg
ggccagtaccgtgcccagccggaagatttttgggtcgatgagcagctggatttcagccct
gaagcacacggggaacatttgtggctgcgagttgaaaagcgcaatcaaaccacgttagat
gtcgtcaatacattaagtcggctttgtggcgtaacgccccgtgatattggttactccggc
atgaaagaccgcattgccgtcacgcgccagtggctgagcgtgcatctgcccggccgcgac
gcgcccacggagcttgagcagtcgcttaatgcgctggggatcactgtcgttgagcaggcg
cgccacccacgtaagctgaagcgtggcgttcaccgcactaaccgttttgtattacgcctt
agcggtgaggccattgaaagcgaagattttgtcagccgctgggaagccctttgtcagcat
ggcgtgcctaactattttggcccccagcgctttgggcccgaaggacgtaatcttcagcgt
gccgaagcattacttaaccgaggttggcgaaaacgcgacgatcgccagggtatgatgctc
tccactgcgcgcagttttttgtttaacgaactgctcagcgcgcgcattgcggatggcacc
tggtcgcagccgctggcgggagacacgttgatgctggacggcacccaaagtgtgtttcgt
atcgacgcctccgaccatacgcttcaggcccgcgccgctgaactggatgtgcatcccact
ggggtgctttggggcgttggtgaagctgaccagggcgacgccgctggctatgaagcccgt
ttgctggagcactaccctgggctatgcagtggcttacaacgcagcggagtaaagcaggca
cgccgtgcacttcgtatgcggctgctggaaccccagtatgcttgggagtcaggtgctgcc
cggctttcgttttcgctgccgcggggcagttttgccaccgccgtgctgggtgagctgatg
ttagcgaactga
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