KEGG   Halomonas sp. A3H3: HALA3H3_690012
Entry
HALA3H3_690012    CDS       T10226                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
haah  Halomonas sp. A3H3
Pathway
haah03030  DNA replication
haah03430  Mismatch repair
haah03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:haah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HALA3H3_690012
   03430 Mismatch repair
    HALA3H3_690012
   03440 Homologous recombination
    HALA3H3_690012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haah03032]
    HALA3H3_690012
   03400 DNA repair and recombination proteins [BR:haah03400]
    HALA3H3_690012
Enzymes [BR:haah01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HALA3H3_690012
DNA replication proteins [BR:haah03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HALA3H3_690012
DNA repair and recombination proteins [BR:haah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HALA3H3_690012
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: CDG54049
LinkDB
Position
hala3h3:3350441..3351166
AA seq 241 aa
MRGIRPRQKIVQADWKGYMAQRAQQAKNPALQQFFGTPLPDPETPISEVPMVALDMETTG
LDERRHAIVSIGLVPFTLNRIKLAERRYWVVNPSRPLAEASITYHHITHSEIAQAPDLDA
ILDELLAQLAGRLVVVHFRNIERPFLNAAVKARRGEGVLFPMIDTMSLEARMHRQTLWAR
FRRWLGRPPVSIRMHASRERYGLPPYQGHHALVDALATAELLQAQIATHYRPETPLKDIW
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgcggtatacgtccacgtcaaaaaatcgtccaggccgattggaagggctatatggcc
caacgagcgcaacaagcgaaaaatcctgcccttcagcaattctttggtacgccgttgcct
gatcctgaaacgcccatttctgaggtgcccatggtggcgctggatatggaaaccactggg
ctggatgagaggcgccatgcgattgttagtattggcctcgtgcccttcacgttaaatcgt
atcaaattggctgagcggcgctattgggtagtgaacccttcgcggccgctagcagaagcc
tcaattacctaccaccacattacccattcagagatcgcccaggcgccggacttagatgcg
atactggacgaactgctggcccagctagcaggtcgcctagtggtcgttcattttcgcaat
attgaacggccctttttgaatgcagctgtcaaagcccgacgtggggaaggggtgctgttt
ccgatgattgataccatgtcgctggaagcgcggatgcaccgccaaaccctatgggcgcgg
ttccgccgctggctgggtcgcccaccggtttccatccgtatgcatgcgagtcgtgagcgc
tatggcttgcccccttatcaaggacatcatgccctagtggatgcattggccaccgcagag
ctattgcaggcgcaaatagccacccattatcgacctgaaacgccattgaaagatatttgg
tgttga

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