Halomonas sp. A3H3: HALA3H3_740008
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Entry
HALA3H3_740008 CDS
T10226
Name
(GenBank) Exodeoxyribonuclease V, subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALA3H3_740008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_740008
Enzymes [BR:
haah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HALA3H3_740008
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HALA3H3_740008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
AAA_16
AAA_28
nSTAND3
UvrD_C
NTPase_1
NACHT
T2SSE
Motif
Other DBs
NCBI-ProteinID:
CDG54364
LinkDB
All DBs
Position
hala3h3:complement(3663953..3666280)
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AA seq
775 aa
AA seq
DB search
MSKRDTASKNESMNLDLFADDAPPAALDSTASATPPTEPTASATQPHPALSDTAALFLLC
ERWVSRGWLRDLDLALVRFLDRETQNAPPLLLLGAALASHQLGRGHVCLDIAATLEAPDF
ALSLPPEGDDLNDPPPLPSHVLATLTLPEWQAALNHPTLISDGPGNTPLVVSHSDNTSKL
YLRRYWQFEQTLHQEIAARLSADSPVHSSEPSPLLKRALDTLFPATDTLDWQKNACALSA
RSPFAIITGGPGTGKTTTVVRLLALLQTLQLAQADAHPLRIRLAAPTGKAAARLNESIAG
QVKDLPLSRLESLLGEQPAAASSNAIDIPTEVTTLHRLLGARADTRHFRHNAANPLALDV
LVVDEASMVDIEMMTALLSALPASAKLVLLGDKDQLASVEAGAVLGDLCRRADAAHYTPA
TAQWLAELTDHPLPATLIDPEGQPLNQAITMLRVSHRFTETSGIGQLAQAINQPLSEALR
ERDKHQAVHSVLNNGYADLHHLVLQPDAQNEDSALERLVITGSTQRFPNAGEGRTNFKGE
PVAPPTGYSYYLSTLASERPDTSLAFEKNSEVYDAWAKQVLSAYSRFQLLCALRKGPWGV
EGLNLRIAKTLRSEKLLFGNDHTLEKGWFEGRPVLVTQNDYGLKLMNGDIGITMAVPDPR
SPSNKPGRSLLRVAFPTSDPENPIHWVLPSRLHAVETVFAMTVHKSQGSEFQHTALLLPQ
TPNPILTRELVYTGITRARDWLTVIEAKRGILNDAVTREVMRVSGVDITRGCINE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcgagacacggcttccaagaacgagtccatgaatctagacctgttcgccgat
gacgcaccgcccgctgcacttgattcaaccgcatcggcaacaccaccgacagaaccaacc
gccagtgctacccagccgcaccccgccctaagtgataccgccgcgctattcctgctgtgt
gagcgctgggtttcccgtggctggctgcgggatctggatctggccctggtgcgctttctc
gaccgcgaaacccaaaacgccccgccgctgctgttactgggcgcggcgctggccagccac
cagcttggccgtggccatgtgtgcctggatatagccgctacgctggaagcgccggatttt
gcgctttcgctgccgccggaaggcgacgacctgaacgacccgccgccgctgcccagccat
gtgctggccacgctaacgctgcccgagtggcaggccgccctcaaccaccccacactgatc
agcgacggccccggcaatacgccgctggtggtaagccacagcgataacaccagcaaactc
tacctacgccgctactggcagttcgagcagaccctacaccaggaaatcgccgctcggctt
agcgcggatagcccggtgcatagctcagagccatcgccgctacttaaaagagctctggat
acactattcccggcaactgacactctggattggcaaaaaaacgcctgcgccctttctgcc
cgcagccctttcgcaatcatcaccggcggccccggcaccggcaaaaccaccaccgtggtg
cgcctgctggccctgctgcaaaccctgcaactggcccaggccgacgcccacccgctacgc
attcgcctggccgcccccaccgggaaagcagccgcacggctgaatgaatccattgccggg
caggtgaaagacttaccccttagcaggttggaatccctattaggtgagcagccagccgcc
gcctcatcgaacgcaatcgacattccgacagaagtcaccacactccaccgcttacttggc
gcccgcgcagacacccgacacttccgccacaacgccgccaacccgctggcgttagatgtg
ctggtggtggatgaagcctcgatggtggatatcgaaatgatgacggcgctgctcagcgcc
ctacccgccagcgccaagctggtgctgctgggggataaagaccagctggcatccgtagag
gcaggcgccgtgctaggcgacctatgccgccgcgccgatgccgcccactacacccccgcc
acggcgcagtggctagccgaactcaccgaccacccgctgccagcaacattaatcgacccg
gaaggccaaccgctgaatcaagccattaccatgctgcgggtaagccaccgctttactgaa
acaagtggcatcggccagctcgcccaggcgattaatcagccgctaagtgaagcattgcgg
gaacgggataaacaccaagccgtacatagcgtactgaataacggctacgccgacctgcac
cacctggtgttgcagccagacgcacaaaacgaagacagcgccctggagcgcctggtgatc
accggcagcacgcaacgatttcccaacgcaggcgaaggccgcaccaatttcaagggcgag
ccggttgcaccgcccaccggctacagttactacctaagtacgctagcgagtgaacggccc
gatacatcgctagcgtttgaaaagaacagcgaagtctacgatgcctgggcaaaacaagta
ctgagcgcctacagccgctttcagctactgtgcgcgctacgcaaaggcccgtggggagta
gaaggcttaaacctacgcatcgccaaaacattgcgcagcgaaaagctgctgttcggcaac
gaccacacactagaaaaaggctggttcgaaggccgcccggtactggtcacccaaaacgac
tatggcctgaaactgatgaacggcgatattggcatcacaatggcggtgcctgatccacga
agcccttcaaataagccaggaagatcgctattaagagtcgcctttccgaccagtgacccg
gaaaaccccattcactgggtgctgccttcccgcctgcacgcggtagaaaccgtgttcgcg
atgacagtacacaaatcacaaggctcagagtttcagcacaccgccctactgctaccgcaa
acacccaacccaattctcacccgcgagctggtctacaccggcatcacccgtgcccgcgat
tggctaacagtgatcgaagccaaacgcgggatattgaatgatgcggtgacgagggaggtt
atgagagttagtggggtggacatcacaaggggttgcataaatgaatag
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