Halomonas sp. A3H3: HALA3H3_790070
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Entry
HALA3H3_790070 CDS
T10226
Symbol
ydiJ
Name
(GenBank) putative conserved FAD-linked oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
haah Halomonas sp. A3H3
Pathway
haah00310
Lysine degradation
haah01100
Metabolic pathways
haah01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
HALA3H3_790070 (ydiJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
Fer4_20
Fer4_10
CCG
ChiW_Ig_like
Motif
Other DBs
NCBI-ProteinID:
CDG54591
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All DBs
Position
hala3h3:complement(3893979..3897185)
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AA seq
1068 aa
AA seq
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MIASLDTRTAPFERLGNEYVRFLQALKTRGFEGEIAPDYANRTVLATDNSIYQRLPQAAV
YPKHAEDLERLTRLAAQTTHRSIVLTPRGGGTGTNGQSLTDGIVVDVSRHMNQILEIDVE
TRRVRVQAGVVKDQLNAALKPHGLFFAPELSTSNRATIGGMISTDASGQGSCEYGKTRDH
VLELDTILIGGKHLHSRALTSDEEQAECQQEGILGRVHATAANIIDQQRELIAAKFPPLN
RCLTGYDLAHLRDSEGQLNLNSLLCGSEGSLGFLNEAVLNVLPIPKHSTLVNVRYTSFMD
ALRDAKALMAASTSSQPQPQALQPQPQALRPTSIETIDDTVLQLAMEDFVWDSVAEFFPA
TANTAIRGINLIEFNDDDESALAKRVRAFTDHLSQDTTVERLGYTLAEGRGQIQKVYAMR
KRSVGLLGNVQGEKRPIPFVEDTAVPPEHLADFITEFRAALDARDLAYGMFGHVDAGVLH
VRPAIDMKDPEQETLIRAVSDEVAALTQKYGGLLWGEHGKGVRSEYSPKFFGELYPSLQR
VKAAFDPYNQLNPGKIASPLSNPPGAAGISTSPDAAGKPQSSELIAKDSDPDLLTVDGVP
MRGQFDRTIDERAWQAYDAAVYCNGNGACYNYDLDDPMCPSWKATRDRRHSPKGRASLIR
EWLRLQTQAGIDVVEESRKKKAEGGWGFIKRFPLRVANTLSRKQHHDYSHEVYDAMAGCL
ACKSCASQCPIKVNVPQFRSQFLEVYHGRYLRPLRDYVIGGTEFMLPTLAKAAPLYNAVI
GQRWVEQLMRRTLGMSDSPALSRASVKKQLNAWGVAEATPLSLALLTEQQRANSVIIVQD
AFTSHFEAKLVMDVVELLSRLNLRVFVMPYSANGKPLQVQGFLGAFERTAAKQAERLRTL
ARFDIPLVGIDPAMTLTYRQEYVKALGNEAVPEVLMLQEWLTTRINTLAPNQLKLTDPGF
KLLSHCTEKTNAPGSPKAWQQVFAAFGLELELVATGCCGMSGTYGHETRNAATSKTIYAQ
SWQPQVEAEENVGKLLATGYSCRSQVKRYSEQVLLHPLQALLIALKRS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgattgcatccttggacacccgtaccgccccgttcgaacgcttgggcaatgagtatgta
cgttttctgcaggcgcttaaaacgcgcggcttcgaaggcgaaatcgctcccgactatgcc
aaccgtacggtgctggcaacggataactcgatttaccagcgcctgccccaggcggcggtc
taccccaagcatgccgaagacctagagcgccttacccggttggccgcgcaaaccactcac
cgcagcattgtattaacgcccagaggcggcggcaccggcaccaacggtcagtcgctcacc
gatggcatcgtggtggatgtctcccgccatatgaatcagatcctagagatcgatgtggaa
acacggcgggtgcgcgttcaggcaggtgtggtgaaggatcaattaaacgcagcgctcaaa
ccccatgggctgtttttcgccccggagctttcgacctccaaccgcgccaccattggcggc
atgatctctaccgatgccagcggccagggcagctgcgaatacggaaaaacccgtgatcat
gtgctggagctcgataccattttgatcggtggaaagcacctgcacagccgcgctttaaca
tcggacgaagagcaggctgagtgccagcaggaaggtattctgggccgcgtacatgccacc
gccgccaatattatcgaccaacagcgcgaattgattgcagccaagttcccaccgctcaac
cgctgcttgaccggctacgatttggcccacctgcgcgatagcgaggggcagctcaacctc
aacagcctgctgtgcggctcggaaggctcgctgggctttttgaacgaggcggtgttgaat
gtgctgccgattcccaagcactccactctggtcaatgtgcgctacaccagttttatggat
gcactgcgggatgccaaagcgctgatggccgctagcacctcttcacaacctcagccgcag
gcgctacaaccccagccgcaggcgctgcgccctacttccatagagaccatcgacgacacc
gtgctgcagttggccatggaggacttcgtctgggacagcgtggcggagttcttcccggca
accgctaacacggcgattcgtggtattaacctgatcgaatttaatgacgacgatgagagc
gccctcgccaagcgggttcgcgccttcaccgaccacctaagccaagacaccaccgttgag
cgcctaggctacaccttggccgaggggcgcgggcagatccagaaagtctacgccatgcgc
aagcgctcggtgggtttgctcggcaatgtgcagggcgagaagcggccgattccgtttgtg
gaagataccgccgtgccgccggagcacttggcggactttatcaccgagttccgcgccgcg
ctggatgcccgagacctcgcctacgggatgtttggccatgtcgacgccggtgtactgcac
gtgcgccccgccatcgatatgaaggatcccgaacaggaaacactgattcgcgcggtgtcc
gatgaagtggcggcgctgacccagaaatatggcggcctgctgtggggcgaacacggtaag
ggcgtgcgctcggagtactcacctaaattctttggtgagctctaccccagcctacagcgg
gtaaaagccgcctttgacccctataaccagctaaaccctggcaagatcgcctcacctctc
tctaacccgccaggggccgcgggcatttccacctcgcccgacgctgcgggcaagcctcag
agtagcgagctaatcgccaaagatagcgaccccgatctgttgacggtggatggcgtgccc
atgcgcggtcagtttgaccgcaccatcgatgagcgcgcctggcaggcctatgacgccgcg
gtgtattgcaacggtaacggcgcttgctacaactacgaccttgatgaccccatgtgcccc
tcctggaaggcgacgcgggatcgtcgtcactcgcccaaaggccgcgccagcctgatccgc
gagtggctgcgcctgcagacccaggcgggaatcgatgttgttgaggagtcgcgcaagaaa
aaagccgaaggcggctggggctttattaaacgctttccgctgcgggtggcgaatactcta
agccgcaagcagcaccacgactactcccatgaagtttatgacgccatggcgggttgcctg
gcgtgtaagtcctgcgcgagtcagtgcccgatcaaggtcaacgttccccagttccgctcg
cagttcttggaggtctaccacggccgttacctgcgcccgctgcgcgactacgtgattggc
ggcaccgagtttatgctgcctaccctggccaaagccgcaccgctgtataacgccgtgatt
ggccagcgctgggtagagcaactgatgcgccgtacgctgggcatgagcgactccccggcg
ctttcacgggccagtgttaaaaagcagctaaacgcctggggcgttgccgaggcaacaccg
ctctcactggccctgttaaccgaacagcagcgcgccaatagcgtgattattgtccaggat
gccttcaccagccactttgaagccaagctggtgatggacgtggtggaactgctgtcacgc
ctcaatctacgcgtgtttgtgatgccctattcggcgaacggcaaaccactccaggtgcag
ggcttcttgggcgccttcgaacgtaccgccgccaagcaggccgagcggctacgcaccttg
gcccgctttgatatccccctggtgggtatcgacccggcgatgacgctcacctatcgccag
gagtacgtcaaagcgctaggtaatgaggcggtgccggaggtgctgatgctgcaggagtgg
ctcacgacccgcatcaatacgctagcgcccaaccaacttaagctaaccgaccccggcttt
aagctgctctcccactgcaccgagaaaaccaatgcaccgggtagccctaaagcatggcag
caggtatttgcggcgtttgggttagagcttgagctggtggccaccggttgctgtggtatg
tctggcacctacggccacgaaacccgcaacgccgctacgtccaaaacgatctacgcccag
tcgtggcagccccaggtggaggccgaagaaaacgtaggcaagttactggccaccggttac
tcctgccgcagccaggtaaagcgctactctgaacaagtgctgctacatcctttacaggcg
ttactcattgccctaaagcgcagctaa
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