Halomonas sp. A3H3: HALA3H3_890001
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Entry
HALA3H3_890001 CDS
T10226
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
haah Halomonas sp. A3H3
Pathway
haah00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HALA3H3_890001 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
haah01007
]
HALA3H3_890001 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haah03016
]
HALA3H3_890001 (aspS)
03029 Mitochondrial biogenesis [BR:
haah03029
]
HALA3H3_890001 (aspS)
Enzymes [BR:
haah01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HALA3H3_890001 (aspS)
Amino acid related enzymes [BR:
haah01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HALA3H3_890001 (aspS)
Transfer RNA biogenesis [BR:
haah03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HALA3H3_890001 (aspS)
Prokaryotic type
Other AARSs
HALA3H3_890001 (aspS)
Mitochondrial biogenesis [BR:
haah03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HALA3H3_890001 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
CDG55296
LinkDB
All DBs
Position
hala3h3:complement(4611853..4613634)
Genome browser
AA seq
593 aa
AA seq
DB search
MRSHYCGQLNETLVDQTVTVCGWVHRRRDHGGVIFLDMRDRDGIAQFVVDPDTAEAFANA
DRARSEFVLRITGRVRLRPEGTQNANMPTGMIEVLAKDVEVLNTAVTPPFQLDEHGKVGE
EVRLKHRYIDLRRPDMIEKLRLRSRISHNVRAYLENQGFLDIETPVLTRATPEGARDYLV
PSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIEASF
VEENDIMGITEAMIRQLFQDVLKAELPEFPRMTWQEAMDRFGSDKPDLRIPLELTDVDDL
MQQVDFKVFSGPASADDGRVAALKVPGGAKLSRKEIDEYTKFVGIYGAKGLAWIKVNERA
KGLEGLQSPIVKFMENIVEELLDRVGAEDGDIIFFGADKARIVNEAIGALRVKLGADLEL
YTQEWAPLWVVDFPMFEADDSGRLSPLHHPFTAPSCTPEELKADPANALSRAYDMVLNGT
ELGGGSIRIHDQTMQSTVFEILGIGEEEAQEKFGFLLDALQYGAPPHGGLAFGLDRLVML
MVGAKTIREVIAFPKTQSAACLMTNAPGEVSPEQLKDLNIRLRQKVKAEPAAE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccattattgcggccagctaaacgaaactttggtggatcaaacggttacggta
tgcggatgggttcatcgccgccgtgaccacggtggggtaattttcctcgatatgcgcgat
cgcgacggcatcgcacagttcgtggtcgaccctgataccgccgaggcattcgctaatgcc
gaccgtgcccgcagtgaatttgtcctgcgtatcactggtcgcgttcggctgcgcccagaa
ggcacccaaaacgccaacatgccgacgggtatgattgaagtgttggcaaaagacgttgaa
gtgctcaacaccgccgttaccccgccattccagctggatgagcatggcaaggtcggcgaa
gaagtgcgcttaaagcatcgctatatcgatctgcgtcgcccggatatgatcgagaagctg
cgtctgcgctcgcgtatttctcataacgtgcgcgcgtacctcgaaaaccaaggcttcctg
gatatcgaaacgccggtactcacccgcgctacgccagagggtgctcgtgattacctggtg
cctagccgtacccacgcgggtagtttctttgcactgcctcagtcgccgcaactgtttaag
cagctgttgatggtggcgggctttgaccgctactaccaaattgccaagtgcttccgcgat
gaagatttgcgcgccgaccgtcagcctgagttcactcagattgatatcgaggcgtcgttt
gtggaagagaacgacatcatgggcattaccgaagccatgattcgtcagcttttccaggac
gtgctaaaagccgaactccctgagttcccgcgcatgacctggcaggaagcgatggaccgc
ttcggttccgataagccggatctgcgtatcccgctggaactgaccgatgtcgacgacctg
atgcagcaagtcgatttcaaagtcttctctggccccgccagcgcggatgatggtcgcgta
gcggcgctgaaagtacccggcggcgccaagctatcgcgcaaagagatcgacgaatatacc
aagtttgtcggcatctacggcgccaaaggcttggcgtggatcaaggtcaacgagcgcgcc
aaagggcttgaaggtctgcagtctccgatcgtcaagtttatggaaaacatcgttgaagag
ctgctcgaccgcgtgggcgcagaagatggtgacatcatcttcttcggtgccgataaagcc
cgtatcgttaacgaagccattggcgcgctgcgcgtcaagctcggtgctgatctggaactc
tatactcaagagtgggcgccactgtgggtagtcgacttcccaatgtttgaagccgacgac
agtggtcgcctgagcccgctgcaccacccctttaccgcgccttcctgcacaccggaagag
ctcaaggcagaccccgccaatgcgctttcacgcgcttacgatatggtgctcaacggtacc
gaattgggcggcggctctattcgtatccacgatcagaccatgcagagcacggtgtttgag
attctaggcatcggtgaagaagaagcccaagagaaatttggcttcctgctggatgcactt
cagtatggtgcaccgcctcatggtggcttagcctttggcttggatcgcttggtcatgctg
atggtcggtgccaaaactattcgtgaagtcatcgccttcccgaaaacccaaagcgctgcc
tgtttgatgaccaatgcaccgggcgaagtcagccccgagcagttgaaagatttgaacatc
cgcctacgtcagaaagtcaaagcggaacccgccgccgaataa
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