Halomonas sp. A3H3: HALA3H3_890011
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Entry
HALA3H3_890011 CDS
T10226
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
haah Halomonas sp. A3H3
Pathway
haah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HALA3H3_890011 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_890011 (uvrB)
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HALA3H3_890011 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HALA3H3_890011 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
DUF87
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
CDG55306
LinkDB
All DBs
Position
hala3h3:complement(4622753..4624777)
Genome browser
AA seq
674 aa
AA seq
DB search
MSKAFRLQSKFQPAGDQPAAIKGLISGLESGLAHQTLLGVTGSGKTFTMANVVEQQQRPT
IVMAPNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRAFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADSDEEAVRVELFDSEIDTIRLFDPLTGAVRGEVPR
MTIYPKSHYVTPRETILGAIDAIKEELKERLEWMRKHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWEAISPQTIFVSATPGRYEGEHASQTVEQVVRPTGLLDP
EIEVRPASTQVDDLLSEIGLRTAVGERVLVTTLTKRMAEDLTEYFDEHGIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNAHGKAILYGDRITDSMRKAIDETERRRAKQTEHNLEHGITPTTVTRSVADILEAAQ
APGKKNSRRRGNERKVAESAAEYDVTTMSKHDLLGAISKLEDAMFEAAQNLEFEEAARLR
DQLHQMKDKQLALG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcctttcgattgcagtcaaaatttcagcccgctggcgaccagcctgctgct
attaaagggctgattagtggcctggaatctgggcttgctcaccaaacgctgcttggcgtg
accgggtcgggcaaaaccttcaccatggccaatgtggtggaacagcagcagcgcccgacc
atcgtgatggcgccgaacaagaccctggctgcccagttgtatggcgaattcaaggcgttt
ttcccggataacgccgtagagtatttcgtctcctactacgactactaccagccggaagcc
tatgtgccttcctcggatacctttatcgagaaagatgcctcgataaacgaccatatcgag
cagatgcggctttcggccaccaaggcactgctagaaaggcgcgatgcgctgattgtggta
tcagtgtcagcgatttacggcttgggtgaccccgaccaatacttaaagatgcgtctgcac
ttcactcgcggcgagttgattgaccagcgcgctttcctgcggcgcttggccgagcttcag
tacactcgtaatgatatggatttccgccgcggtacttaccgggtgcgcggcgatgtgatc
gatatctttcctgccgactctgacgaggaggcggtgcgggtagagctgtttgacagcgaa
atcgacactatccgactgtttgatccgctcactggcgctgtccgcggggaggtgccaagg
atgactatctatccaaaatcgcactacgtcaccccccgggaaacgattctgggcgccatt
gatgccattaaagaggagctcaaagagcgactggagtggatgcgtaagcatgaacggctg
gtagaagcacagcgtcttgagcagcgcacactttacgatattgagatgatgctggagctg
ggttactgcaacggtatcgaaaactactcccgctacctctctgggcgtgcccccggcgag
ccaccgcctactttctttgattacctgcccgatgacgcactgctatttatcgacgagtcc
cacgtcagcgtgccccaggtaggtggtatgtacaaaggcgaccgttcgcgtaaagagacc
ctggtcgagtatggtttccggttgccttcggcgttggataaccggcccatgaagtttgaa
gagtgggaggccatttcaccacaaaccatctttgtttccgccactccaggccgctatgag
ggcgaacacgctagccagaccgttgagcaggtggtgcgtcccaccgggctgctggatcct
gaaattgaagtgcgtccggccagtacccaagtagacgatctgctatcggaaattggactg
cgcactgcagtaggtgagcgggtgctggtgaccacgctaaccaagcgtatggcggaagac
ctgaccgagtattttgacgagcacggcattcgagtgcgctatttacattcggatatcgac
accgtcgagcgggttgagattattcgtgacttacgcctgggcaagtttgatgtgttagtg
ggcatcaacctgctacgtgaaggcctggatattcccgaagtatcgttggtggcaattctc
gacgccgataaagagggctttctgcgtgccgagcgctcgctgatacagaccattggccgt
gctgcccgtaacgcccacggcaaggcgattctttacggtgatcggattactgactcgatg
cgcaaggcgattgatgaaaccgagcgtcgtcgcgccaagcagaccgaacacaacctagaa
cacggtattacgccaacaacggttacccgctcagtggccgatatccttgaagccgcccag
gcgccgggcaagaagaacagccgtcggcgtggtaatgagcgcaaggtggcggaaagcgcc
gccgagtatgatgtcaccacgatgagcaagcatgatctgttgggcgccatcagcaagctc
gaagacgccatgtttgaggcagcacaaaatctggagttcgaagaggcggctcggcttcgc
gaccagctccatcaaatgaaagacaaacagctggcgctgggctag
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