Halomonas sp. A3H3: HALA3H3_900046
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Entry
HALA3H3_900046 CDS
T10226
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HALA3H3_900046 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haah03019
]
HALA3H3_900046 (groL)
03110 Chaperones and folding catalysts [BR:
haah03110
]
HALA3H3_900046 (groL)
03029 Mitochondrial biogenesis [BR:
haah03029
]
HALA3H3_900046 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haah04147
]
HALA3H3_900046 (groL)
Enzymes [BR:
haah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HALA3H3_900046 (groL)
Messenger RNA biogenesis [BR:
haah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HALA3H3_900046 (groL)
Chaperones and folding catalysts [BR:
haah03110
]
Heat shock proteins
HSP60 / Chaperonin
HALA3H3_900046 (groL)
Mitochondrial biogenesis [BR:
haah03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HALA3H3_900046 (groL)
Exosome [BR:
haah04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HALA3H3_900046 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HALA3H3_900046 (groL)
Exosomal proteins of breast cancer cells
HALA3H3_900046 (groL)
Exosomal proteins of colorectal cancer cells
HALA3H3_900046 (groL)
Exosomal proteins of bladder cancer cells
HALA3H3_900046 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CDG55505
LinkDB
All DBs
Position
hala3h3:4792716..4794359
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKQVKFSDDARKRMARGVDVLANAVKVTLGPKGRNVVLEKSFGSPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASQTSDAAGDGTTTATVLAQAIIAEGLKGVTAGMNPMDLKRGI
DQAVNAAVKEIKAMSVPCTDTKSIAQVGTISANGDKRIGEIIAEAMEKVGKEGVITVDEG
RGFEDELEVVEGMQFDRGYLSPYFVTNQDTMTVELEDPYILLVDKKISNIRELLPVLEAV
AKQGKPLAIIAEDIEGEALATLVVNNMRGIVKVAAAKAPGFGDRRKSMLQDIAILTNGTV
ISEEVGLTLEQANLDHLGTAKRMTMSKENTTIIDGAGAEGDIEARVSQIRAQIEDTSSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGTALV
RVMAKVQGLTGDNEDQNHGINMALRAMQSPLRQIVSNAGEEPAVVINRVKDGEGNFGYNA
QTGEYGDLFEMGVLDPAKVTRTALQSAGSVAGLMITTECMIAEDPEEKDSAPDMGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaaacaagttaagttctccgatgatgctcgtaaacgcatggcccgtggtgtc
gacgttctcgccaacgcggtaaaagttaccctcggcccgaaaggccgtaacgtagtactg
gaaaaatctttcggctcccccaccgttactaaagacggtgtttctgttgccaaagagatc
gaactgaaagacaagttcgaaaacatgggcgcgcaaatggtgaaagaagtcgcttcacag
acttctgacgctgcaggcgatggcacgactaccgctactgttctggcccaggccattatc
gctgaaggcctgaaaggcgtgacggcgggcatgaacccgatggatcttaagcgcggcatc
gaccaagcggtcaacgcagcggtgaaagaaatcaaagcaatgtctgtcccctgcaccgac
accaagtcaattgcccaggttggcaccatctctgcaaacggcgacaagcgcatcggtgaa
atcatcgccgaagcgatggaaaaagtcggcaaagaaggcgtcatcactgttgatgaaggc
cgtggctttgaagacgagctggaagtcgttgaaggtatgcagtttgaccgcggctacctc
tcgccctacttcgttaccaaccaggacaccatgacggttgaactggaagatccctacatc
ctgctagtggataaaaagatctccaacatccgtgagctgctgccagtgctagaagccgtt
gccaagcaaggcaagccactggccatcatcgctgaagatatcgaaggcgaagccctggca
acgttggttgtgaacaacatgcgcggtatcgttaaagtagccgctgctaaagcaccgggc
ttcggcgaccgtcgtaagtccatgctgcaggatatcgctattctgactaacggcacggtc
atttctgaagaagtcggcctgacgcttgagcaagccaacctggatcacctgggtactgct
aagcgcatgacgatgtctaaagaaaacaccactatcattgatggtgctggtgcagaaggc
gatatcgaagcacgcgttagccagatccgcgcgcaaatcgaagacacctcttctgactac
gacaaagagaaactgcaagagcgcgttgccaaactggcaggcggtgttgccgttatccgc
gtcggtgctgccaccgaagtggaaatgaaagagaagaaagcccgtgttgaagacgctctg
cactctactcgtgcagcagttgaagaaggcgtggtgcctggtggtggtacagcactggtt
cgcgtaatggccaaagtacagggccttactggcgataacgaagaccagaatcacggtatc
aacatggcgctacgcgctatgcagtcaccgctgcgtcaaatcgtttccaacgctggtgaa
gagcctgccgttgtgattaaccgtgtgaaagatggcgaaggaaacttcggctacaacgca
caaaccggcgagtacggcgatctgttcgaaatgggcgtcctggatccagcgaaagtaacc
cgtactgcactgcagtccgctggttctgttgctggcctgatgatcaccactgagtgcatg
atcgcagaagatccggaagagaaagactctgcacctgatatgggtggcatgggcggaatg
ggtggcatgggcggcatgatgtaa
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