Halomonas sp. A3H3: HALA3H3_910044
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Entry
HALA3H3_910044 CDS
T10226
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
haah Halomonas sp. A3H3
Pathway
haah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HALA3H3_910044 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haah03400
]
HALA3H3_910044 (nfo)
Enzymes [BR:
haah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HALA3H3_910044 (nfo)
DNA repair and recombination proteins [BR:
haah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HALA3H3_910044 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CDG55559
LinkDB
All DBs
Position
hala3h3:4856684..4857526
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AA seq
280 aa
AA seq
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MKYLGAHVSAAGGADQAVQRAVEIGADAFALFTKNQRQWKGKPLTDEAIQAFRDACAEHN
FSAEQILPHDSYLINLGHPEQEGLRKSRDAFLDEMQRCEQLGLTLLNFHPGSHLNKISES
DCLKRIAESVNEALTHTQGVTAVIENTAGQGTNLGWRFEHLAEIIAHVDDKTRVGVCIDT
CHAFAAGYDLRTTEATQATLDELDSVVGFEYLRGMHLNDAKSNLASRVDRHHSLGKGNIG
LPAFTTIMQEPRINGIPMILETIEPEIWADEIAWLRAQAS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtacctaggagcccatgtgagcgccgctggcggcgcagaccaagccgtgcagcga
gcagtggaaatcggtgcggatgcgtttgcgctattcaccaaaaatcagcgtcaatggaaa
ggtaaaccgctcaccgatgaggcgattcaagcctttcgcgatgcctgtgccgagcacaac
ttttctgcagagcagattttgccccacgacagctatctgattaatctgggtcaccccgag
caggaagggctgcgcaaatcccgcgatgcgtttctggatgagatgcagcgctgcgagcag
ttggggctgacgctgcttaattttcaccctggcagccatttgaacaaaatcagcgaaagc
gactgcttaaagcgtattgcagaatccgttaacgaagcgctaacgcatacccaaggcgtt
accgcagtcattgaaaataccgctggccaaggcactaacctgggttggcgcttcgagcat
ttggccgagatcattgcccacgtggacgataaaactcgcgtgggggtgtgtattgacacc
tgccacgcctttgcggcgggctatgatctacgcacgacagaggccacccaagcaacgctt
gatgagctagacagcgtggtcggctttgagtatctgcgcggcatgcatttaaacgatgcc
aaaagcaaccttgccagccgcgtggatcgccaccatagcctgggtaaaggcaatattggc
ctacctgcctttaccaccatcatgcaggaaccacggattaacggcattccaatgatactg
gagaccatcgaacccgagatatgggccgatgaaatagcttggctacgcgctcaagcctcc
tga
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