Halomonas sp. A3H3: HALA3H3_930011
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Entry
HALA3H3_930011 CDS
T10226
Symbol
rluF
Name
(GenBank) Ribosomal large subunit pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
haah Halomonas sp. A3H3
Brite
KEGG Orthology (KO) [BR:
haah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haah03009
]
HALA3H3_930011 (rluF)
Enzymes [BR:
haah01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
HALA3H3_930011 (rluF)
Ribosome biogenesis [BR:
haah03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HALA3H3_930011 (rluF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
CDG55676
LinkDB
All DBs
Position
hala3h3:complement(4976275..4977291)
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AA seq
338 aa
AA seq
DB search
MCSRREADRFVEQGNVWINGRRATTGDQVVAGDLVKVNGQEIEPQEEEDLVLIALNKPVG
IVSTTESSEKDNIVEFVKHGVRIFPIGRLDKDSQGLIFLTNNGDLVNKILRANNNHEKEY
QVTVNKPITDEFIEGMQSGVPILGKVTKRCKVQKESTFVFTITLVQGLNRQIRRMCEYFG
YEVTQLIRTRIMNVPLKGLALGDWRDLTAKEIDTIIALTERSEAAPEKKSKAKPERPNYS
SGAGKAKPPSAKGRPAKAGAKAAGAKAAGAKPPVKGKKAVSGKTGTGPKGSTLGKPHSKG
SKAPGKLGAKSKPGAKGKPVGKGRGKPAAVGKPSQRRK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctcgccgtgaagccgaccgttttgtggagcagggcaacgtatggataaacggt
cgccgtgcgactaccggtgatcaagtggtggcgggtgacttggttaaagtaaacggtcag
gagatcgagcctcaggaagaggaggatctggtactgatcgcgctgaacaaaccggtgggc
attgtcagtaccactgagtccagcgaaaaggacaatatcgttgagtttgtgaagcatggc
gtgcgtatttttcccattgggcggctcgataaagactctcaggggctgatttttttaacc
aataacggcgatctggttaataagattctgcgcgccaataacaaccacgaaaaagagtac
caggtgacggtgaacaagccgatcaccgacgagtttatcgagggcatgcagagtggtgtg
ccgattcttggcaaggtgactaagcgctgcaaggtgcaaaaagagtccacctttgtgttc
accatcactctggtgcaggggctcaatcggcaaattcgccgtatgtgcgaatacttcggc
tatgaagttacccagcttattcgcacgcgtattatgaatgtacccctcaaaggcttggcc
ctgggcgactggcgcgatcttactgccaaagagatcgataccattatcgcgctgaccgaa
cgctcagaggcggcacccgagaagaaaagtaaagctaagccggaaagacccaactacagc
tcaggcgcaggaaaggcaaaaccgccttccgcgaaagggcgcccggccaaagcaggcgcg
aaggcggctggtgccaaagcggccggggctaaaccacccgtcaagggtaaaaaagccgtc
agtggaaaaacaggtaccggcccgaaaggcagtacgttaggcaagccgcactccaagggc
agcaaagcccccggcaagcttggtgctaaaagcaagcctggagctaaaggtaagcccgtt
ggtaaaggccgcggtaagccagcggcggtcggaaagccttcccagcggcgcaagtaa
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