Halomonas sp. A020: HaloA020_00230
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Entry
HaloA020_00230 CDS
T10931
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
haaz Halomonas sp. A020
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haaz03400
]
HaloA020_00230
Enzymes [BR:
haaz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HaloA020_00230
DNA repair and recombination proteins [BR:
haaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HaloA020_00230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
LytR_C
Motif
Other DBs
NCBI-ProteinID:
BCB59322
LinkDB
All DBs
Position
20254..21867
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AA seq
537 aa
AA seq
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MSKPLLLVLGDQLTLTLPTLREAPSNAVVALCEVAEEARYVPHHLHKIGLFMAAMRHFAD
ALRDKGYTVHYSRINDGDNTQSLIEEAERLAKQYGCDEIRVTRPGEWRLWNDMQQRQHNA
LPWQLWEDDRFFTTPDDFSRWAEGRKQLRLEYFYREQRKRTGLLMEGDTPSGGQWNYDHD
NREPIDTSLSFPALPNHGQDDVTKAALKDAADHFADHMGTMETFNLPVTRRQALVDLNHF
IEHGLADFGRYQDAISDREPFLYHSRLSAAMNIGLLSPMEVCDAAEAHYHAGKAPINAVE
GFIRQILGWREYVRGLYWTHMPGYKQENQLGFTRELPAFYWDANTDMRCLQRAIQMTIDN
SYAHHIQRLMVTGNFALLCGVKPEALCDWYLAVYADACEWVELPNTLGMVLHADGGLMGS
KPYCASGKYIDKMSDHCQHCRYSPKQMTGPKACPFNSLYWHFLETNAERLNRNPRMKLIY
GSLGRMKEEKREAIRQQAEQFLAKLPTSKGYGQPAHTKGYASAAQHASSTSNSENRS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccgttactcctggtactgggtgatcagctcacgctgacgctgccaaccctt
cgcgaagcgccttccaatgcggtggtggcgctgtgcgaagtggccgaagaagcacgctac
gtgccgcaccatctgcataagatcggtcttttcatggccgccatgcgccactttgccgac
gccttgagagacaaaggctatacggtgcattacagccgcatcaatgatggcgataacacc
cagtcgctgatagaagaagccgagcggctcgccaagcagtacggctgtgatgaaattcgc
gttacccgccccggcgagtggcggctgtggaacgacatgcagcagcgccaacacaacgcc
ctcccctggcagctgtgggaagatgaccgcttcttcaccacaccggacgacttttcacgc
tgggcagagggccgcaaacagctgcgcctggagtatttctaccgcgagcagcgcaagcgt
accggcctgctcatggagggcgacacgcccagcggcggccagtggaattacgaccacgac
aaccgcgagcccatcgatacctcgctgagctttcctgcgctgcccaaccacggccaggat
gacgtgacaaaagcagctcttaaggacgccgctgaccatttcgctgatcacatgggaacg
atggagaccttcaacttgccggtcacccggcggcaggcactggtcgatttgaaccacttc
atcgaacacgggctagcagactttggccgctaccaagatgccattagtgaccgagaaccc
tttttgtatcactcacgcctgtctgcggcgatgaacattggcctgctctcgccgatggaa
gtgtgtgacgccgccgaggcgcactaccatgcgggcaaagcgcctatcaatgcggtagag
ggtttcatccgccaaatactcggctggcgcgaatacgtgcgcgggctctactggacgcac
atgcccgggtacaaacaggagaaccagctaggcttcacccgcgagctgcccgcgttttat
tgggacgccaacaccgacatgcgctgcctgcagcgcgccattcaaatgaccatcgacaac
agctatgcgcaccacatccagcgactcatggtcaccggcaactttgccctgctgtgcggc
gtcaagcccgaagcgctgtgcgactggtacctcgccgtctacgccgatgcctgcgagtgg
gtcgaactgcctaataccctcgggatggtactgcacgccgatggcggtttgatgggctcc
aagccttactgcgcttcgggtaaatacatcgataagatgtctgatcactgtcagcactgt
cgctactcgcccaaacagatgaccggccccaaagcctgccctttcaacagtctttactgg
cactttttggaaaccaatgcggaacggctcaaccgtaatccacgaatgaagctcatttat
ggctcgttaggacgcatgaaagaggagaagcgcgaggccattcgccagcaggccgagcaa
ttccttgccaaactgccaaccagtaaaggctacggccaaccggcgcatacgaagggctat
gcctctgctgcccaacacgcttcctctacatctaactcggagaaccgctcatga
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