Halomonas sp. A020: HaloA020_00810
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Entry
HaloA020_00810 CDS
T10931
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
haaz Halomonas sp. A020
Pathway
haaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HaloA020_00810 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haaz03400
]
HaloA020_00810 (recD)
Enzymes [BR:
haaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HaloA020_00810 (recD)
DNA repair and recombination proteins [BR:
haaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HaloA020_00810 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
SLFN-g3_helicase
AAA_28
nSTAND3
AAA_16
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BCB59380
LinkDB
All DBs
Position
84329..86539
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AA seq
736 aa
AA seq
DB search
MSRQHDSHTFDMFGEAASAHPALSSTPELLALCERWVARGWLRDLDRALVRFLASETPDA
PTLLLLAAALASHQLGRGHVCLDINATLNAPDFALSLPPEGDDLTDPPPLPSDVLATLTL
SEWQAALHNPLLTSEGPGNTPLVVVTTHSASGTPSTRLYLRRYWQYEQSLHQHIAARLET
TSDASASGLLPQALNILFKQRNGLDWQKTACALAVRSRFGIITGGPGTGKTTTVVRLLAL
LQTLQLAQHPSQPLRIRLAAPTGKAAARLNESIAGQVDALPLAELATLLSEHSPAAAASE
IAIPTDVTTLHRLLGARPDTRHFRHSAANPLALDVLVIDEASMVDIEMMAATLSALPAHA
QCILLGDKDQLASVEAGSVLGDLCHRAEAAHYTPATAEWLAQATGRPLPAEFIDPAGQPL
DQAITMLRVSHRFNEHSGIGQLAKAINQPGHTQSEREKQQAVSAVLRHGYPDIHHLVMSD
DAALDKLVIHGSPSGFAGNGEGRTDHQGQPIAPPTGYRHYLNVLHAQRPRGESFEENQTA
FDAWASEVISAYSHFQLLCALRKGPWGVEGLNQRIASTLRREKLLYGSDYTLEKGWYEGR
PVLVTQNDYGLKLMNGDIGITLAVPDPRNPQQKLLRVAFPSSSAASDTDKPIHWVLPSRL
HAVETVFAMTVHKSQGSEFLHTALLLPPTLNPILTRELVYTGITRAREWLTVVEAKRGVL
NEAVVREVVRVSGVGG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccagcacgatagccacaccttcgatatgttcggcgaagccgccagcgcccac
ccggcactcagcagcaccccggaactgctggccctgtgcgaacgctgggtagcgcgcggc
tggctgcgggatttagaccgcgccctggtgcgctttctcgccagtgaaaccccggatgcc
cccacgctgctgctactggcggcagcacttgccagccaccagctaggccgcggccacgta
tgcctggatattaacgccacgctcaacgcgccagatttcgccctttcgctgccgcccgaa
ggcgacgacctcaccgacccgccgccgctgcccagcgacgtgctggcaacacttacgctc
agcgaatggcaagccgccctgcacaacccgctgctcaccagcgaaggccccggcaacaca
ccgctggtagtagtaaccactcactcagccagcggcacgcccagcacccggctctacctg
cgccgctactggcagtacgagcaaagcctgcaccaacacatcgccgctcgcttagaaaca
acgagtgacgccagcgcctcggggttactcccccaagcgctcaacatcctattcaagcaa
cgcaacgggctggactggcaaaaaaccgcctgcgccctggctgtccgcagccgcttcggc
atcattaccggcggccccggcaccggcaaaaccaccaccgtggtgcgcctgctcgccctg
ctgcaaaccctgcaactggcccagcaccctagccagccgctgcgaatccgcctagccgcc
cccaccggcaaagccgccgcccgcttgaacgaatctattgcggggcaggtggatgcgtta
ccgctcgctgaattggcaacgctactcagtgaacactcacctgcggcggcagccagcgag
atcgcgattcccacggacgtgaccaccctgcaccgcctactcggcgcacgccccgacacc
cgccacttccgccacagcgccgccaacccgctggcgctggatgtgctggtgatcgacgaa
gcctcgatggtggatatcgaaatgatggccgccaccctcagcgccctgcccgcccacgcc
cagtgcattctgctgggggataaagaccagctcgcctcggtagaggccggttcggtactg
ggcgacctatgccaccgcgcggaagccgcccactacaccccggccaccgccgaatggctg
gcccaggccaccgggcgaccgctgccagcggagttcatcgaccccgctggccaaccgctg
gaccaggccattaccatgctgcgggtcagccaccgcttcaatgaacacagcggcatcggc
cagctggcgaaagccattaaccagccgggccatacgcaaagcgaacgggaaaaacagcag
gcagtaagcgccgtgctgcgccacggctacccggatattcaccacctagtgatgagtgac
gacgccgcgctggataagctggtgattcacggcagccccagcggctttgcgggcaacggc
gaaggccgcaccgaccaccaaggccagcccatcgccccgcccactggctaccgccactat
ttaaacgtgctgcacgcccagcgcccacggggggagtcgttcgaggaaaaccaaaccgct
tttgacgcctgggccagcgaggtaatcagcgcctacagccacttccaactgctgtgcgcg
ctgcgcaaaggcccctggggggtagaaggcttaaaccagcgcattgccagcacattgcgc
cgcgaaaagctgctgtacggcagcgactacacgctagagaaaggctggtacgaaggccgc
ccggtactggtcacccaaaacgactacggcctaaagctgatgaacggcgatatcggcatt
accctggccgtgcccgacccgcgcaatccgcagcagaagctattgagagtcgcctttcct
tcatcaagtgccgccagcgacaccgacaaacccatccactgggtgctgccttcccgcctg
cacgctgtggaaaccgtgtttgcgatgacggttcacaaatcccaaggctcggagttcttg
cacaccgccctactgctaccgcccacccttaaccccattctgacccgcgagctggtatat
accggcatcacccgcgcccgcgaatggctcacggtggtggaagccaaacgcggggtgttg
aatgaggcggtggtgagggaggtggttagggttagtggggtggggggttaa
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