Halomonas sp. A020: HaloA020_05420
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Entry
HaloA020_05420 CDS
T10931
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
haaz Halomonas sp. A020
Pathway
haaz03030
DNA replication
haaz03410
Base excision repair
haaz03420
Nucleotide excision repair
haaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HaloA020_05420 (polA)
03410 Base excision repair
HaloA020_05420 (polA)
03420 Nucleotide excision repair
HaloA020_05420 (polA)
03440 Homologous recombination
HaloA020_05420 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haaz03032
]
HaloA020_05420 (polA)
03400 DNA repair and recombination proteins [BR:
haaz03400
]
HaloA020_05420 (polA)
Enzymes [BR:
haaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HaloA020_05420 (polA)
DNA replication proteins [BR:
haaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HaloA020_05420 (polA)
DNA repair and recombination proteins [BR:
haaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HaloA020_05420 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HaloA020_05420 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
BCB59841
LinkDB
All DBs
Position
complement(595981..598746)
Genome browser
AA seq
921 aa
AA seq
DB search
MARAPIVLVDGSSYLYRAFHALPPLTTSNGQPTGAVKGVLNMLKRLMKDYPDSPMAVVFD
APGKTFRDELYSDYKAHRPPMPDDLRSQIEPLHACVKALGLPLLCIEGVEADDVIGTLAH
HATQAGRDAVISTGDKDMAQLVNGHITLVNTMKEETLDEAGVEEKFGLPPALIIDFLALM
GDKVDNIPGVPGVGEKTAIGLLQGMGGGLDTIYGDLERVTTLGFRGAKTLPKKLEEHREQ
AFLSYQLATIKTDCDLPVGLDDLDIAHPDREALVELYKQMEFKQWLAELLEGNDEGVDDV
AGGEPVSEAADSATETAPTERHDHVITEQAELEAWLERLNEAERFCFDLETTSLNYMDAD
IVGVGIALKAGEAAYIPLAHDYLDAPAQLDRHTVLQALKPLLEDPAKTKIGQNLKYDISV
LANVDIHVVGPLADTMLASYVLNSTATRHDMDSLALKYLGEKTISFEEIAGKGAKQLTFN
QIALEQAAPYACEDVDITLRLQESLRPQVEREGRLAEVLDHLELPLINVLSRIERNGVAL
DAERLHEQSQQLEQRIRELESEAFELAGREFNLGSPKQLGQILFDEQKIPVIKKTPKGAP
STAEAVLEELALDYPLPKVIMQHRGLAKLKSTYTDKLPRLLNKTTGRVHTSYHQAVTATG
RLSSSDPNLQNIPIRTEEGRKIRQAFVARPGYRIVAADYSQIELRIMAHLSEDKGLLEAF
AEGRDIHTATAAEVFGTSLDKVSADQRRSAKAINFGLIYGMSAWGLSRQLHIDRNQAQTY
IDRYFDRYPGVARYMDRIRTQAAEDGFVETVMGRRLYLPEIHSQNRSRRQGAERTAINAP
MQGTAADIIKQAMIDVDTWLAEGEFDALMVMQVHDELVFEVAEAQVDRFIEQVQARMQAA
ASLNVPLIVEAQSGANWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgccccaatcgtgctcgtcgatggctcttcgtacctctaccgcgcgtttcat
gcgctgccgccgctaacgacctctaacggtcagccgaccggggccgtgaagggcgtactg
aacatgctcaaacggctgatgaaagactaccccgatagccccatggcggtggtgttcgac
gcgccgggtaaaaccttccgcgatgagctgtacagcgattacaaggcccatcgtccgccc
atgccggacgacctgcgcagccaaatcgaaccgctgcacgcctgtgtcaaagcactcggc
ctgccgctgctgtgcatcgaaggggtcgaggcggatgacgtgatcggcacgttggcgcac
cacgccactcaggctggccgcgacgcggtgatctccaccggcgataaggatatggcccaa
ctggtgaacggtcacatcacgctggtcaacaccatgaaagaggaaaccctcgatgaagcg
ggcgtggaggagaagtttggccttcctcccgcactgatcatcgacttcctcgcgctgatg
ggcgacaaggtggataacatccccggcgtgcctggggtgggcgaaaaaaccgccatcggt
ctgctgcaaggtatgggcggcggtttggacacgatttatggcgatttagaacgcgtgacc
accctcggtttccgtggcgcgaaaacgttacccaaaaaactggaagagcatcgggagcag
gcctttctctcttatcagctggccaccatcaaaaccgactgcgacttgcccgtgggattg
gatgatttggacattgcccacccggaccgcgaagcgctggtcgagctgtacaaacagatg
gagttcaaacagtggctcgccgagctgctggaaggtaacgacgaaggcgtggacgatgtg
gcaggcggcgagcccgtctcggaagcagccgacagcgcgacggagacggcgccgaccgag
cgccacgaccatgtgattaccgagcaggccgagctggaggcgtggctcgaacggctcaac
gaagccgaacgcttctgcttcgatctggaaaccaccagcctgaactatatggatgccgat
atcgtcggcgtggggattgcattgaaggcaggcgaggccgcctatattccgttggctcat
gattacctggacgccccggcccagttggaccgccacacggttctccaggcgttgaagccg
ctactggaagatcctgccaagaccaagattggccagaacctgaagtacgatatctccgtg
ctcgccaacgtggacattcatgtcgtggggccgctggcggacaccatgctggcctcctac
gtgctcaactccaccgccacgcgtcacgatatggactcgctggcgttgaagtacctgggt
gagaaaaccatttccttcgaagagatcgcaggcaaaggggccaagcagctcaccttcaac
cagatcgccctggagcaggcggcgccttacgcctgtgaggacgtcgacatcaccctgcgc
ctacaagagtcgttgcgcccgcaggtcgaacgggaagggcgtttggccgaggtgctcgac
cacctcgaactgccgctgatcaacgtgctgtcgcgcatcgagcgcaatggcgttgccctc
gatgcggagcgccttcacgaacagagccagcagctcgaacagcgtatccgtgagttagag
agcgaggccttcgagctggcgggccgcgagttcaatttgggctcgcccaagcagttaggg
cagattctgttcgacgagcagaaaatcccggtgatcaagaaaacgcccaaaggcgcgccc
tccacggcggaagcggtactcgaagagctggcgctagactacccgctgcctaaagtcatc
atgcagcaccgtggcctggccaagctgaaatccacctacaccgataagctaccgcgcctg
ctcaacaagacgacggggcgggttcacaccagctatcaccaggcggtcacggcgaccggg
cggctgtcgtcgtcggaccccaacctgcagaacattcccatccgcaccgaggaggggcgc
aagattcgtcaggcgttcgtggcgcgccctggctaccgcatcgtcgcagcggactactcg
cagatcgagctgcgcatcatggcgcatctatctgaagacaaagggctgctagaggcgttt
gccgaagggcgcgatatccacaccgcgacggcggcggaagtcttcggcacctcgctggac
aaggtctccgccgaccagcggcgcagtgcgaaagccatcaactttggcttgatctacggc
atgagtgcctgggggctctctcgccagctgcacattgaccgtaaccaggcgcaaacctac
atcgaccgttacttcgaccgctaccccggtgtggcccgctatatggaccgtattcgtacc
caggcggcggaagatggcttcgtcgaaaccgtgatgggacggcggctctacctgccagag
atccactcgcaaaaccgcagccgacgacaaggcgccgagcgtacggcgatcaacgcgccc
atgcagggtacggcggcggatatcatcaagcaggcgatgatcgacgtagatacatggcta
gcggagggagagttcgacgcgctgatggtcatgcaggtacacgatgaactggtgttcgaa
gtggccgaggcccaggtggatcgctttatcgagcaggtgcaggcgcgcatgcaggcggcg
gcatcgctcaacgtcccgctgattgtagaagcgcaaagcggcgcgaattgggatgaagct
cactaa
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