Halomonas sp. A020: HaloA020_10330
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Entry
HaloA020_10330 CDS
T10931
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
haaz Halomonas sp. A020
Pathway
haaz00300
Lysine biosynthesis
haaz00470
D-Amino acid metabolism
haaz01100
Metabolic pathways
haaz01110
Biosynthesis of secondary metabolites
haaz01120
Microbial metabolism in diverse environments
haaz01230
Biosynthesis of amino acids
Module
haaz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HaloA020_10330 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HaloA020_10330 (dapF)
Enzymes [BR:
haaz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HaloA020_10330 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
BCB60332
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Position
complement(1125083..1125916)
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AA seq
277 aa
AA seq
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MLLHFTKMHGLGNDFMVVDLVTQRARLRDEQIRQLADRRFGIGFDQLLIVEPPRDPDMDF
RYRIYNADGSEVENCGNGARCFARFVRDQRLTHKHDIHVETAGGPLVLHVQHDGMVRVDM
GRPRFNPTALPFETPGDQPLHELEADGETLQIGVVSMGNPHAVLQVENVDSAPVERLGPL
LEAHPRFPNRVNVGFMQVVSPSEIRLRVFERGSGETLACGTGACAAVASGIRQGLLKSPV
KVHLPGGQLSIEWPDPEASLVMVGPATRVFDGRVSLN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcacttcactaaaatgcacggcttgggcaacgacttcatggtggtggatctg
gtcacccagcgggcgcgcctgcgcgacgagcagattcgccagctggcggaccgacgcttc
ggcattggcttcgaccagctgctgatcgtcgagccgccccgcgatccggacatggatttt
cgctaccgtatctacaacgccgacggtagcgaagtggagaactgtggcaacggcgcgcgc
tgctttgcccgcttcgtgcgcgaccagcgcttgacccataagcatgacatccacgtggaa
accgccggaggcccgctggtgctccacgtacagcacgacggcatggtacgcgtggacatg
ggcaggccgcgcttcaacccaaccgcgctgcctttcgagacgccgggtgaccagccgctg
cacgagctggaagccgacggtgagacgctgcagattggtgtggtgtccatgggcaacccc
catgcggttctccaggtcgagaacgtcgatagcgcgccggtggagcgcctggggccactg
ttggaggcgcacccgcgctttcccaaccgggtcaacgtgggcttcatgcaggtggtctcg
cccagcgaaattcgcctgcgggtattcgaacgaggcagcggtgaaaccctggcctgcggc
accggtgcctgtgcggcggtggccagcggtattcgtcagggtcttttgaagagtccggtg
aaagtgcatttgcccggcgggcaactcagcatcgagtggccggaccctgaggcgtcgctg
gtcatggtgggccccgccacgcgggtgtttgacggtcgggtatcactcaactaa
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