Halomonas sp. A020: HaloA020_10790
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Entry
HaloA020_10790 CDS
T10931
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haaz Halomonas sp. A020
Pathway
haaz03420
Nucleotide excision repair
haaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HaloA020_10790 (uvrD)
03430 Mismatch repair
HaloA020_10790 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haaz03400
]
HaloA020_10790 (uvrD)
Enzymes [BR:
haaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HaloA020_10790 (uvrD)
DNA repair and recombination proteins [BR:
haaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HaloA020_10790 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HaloA020_10790 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
BCB60378
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All DBs
Position
1174064..1176262
Genome browser
AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNPAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAREMRTRLEALLGISMRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLIKRLLKDYSIDDERFPPRQVQGFIAGCKEEGLRPHQVNVNGDGYLAQMVELYERYQF
TCERGGLVDFGELLLRSLELLRDNPPLLNHYRERFGHVLVDEFQDTNTLQYAWLKLLTGQ
QTPMTAVGDDDQSIYGWRGAKVENIRRFEEEFPDTHTVRLEQNYRSTSAILDAANALISH
NSERLGKNLWTDGIEGEPISVYAGFNDLEEARYIVDTIKEKIEEGFNRRDVAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPTRGIG
TRTVEIVRHRAREQSVSLWQALHDAIQDGTLKGRAGNAVQAFANLIEQLDNDAAGLPLHE
IIDHVTAHTGLIEHHQSERGEKGQARVENLEELVTAARAFTHGDAFETPEAGEGMAALEA
FLSEAALNAGDHEAEEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSVEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHVSRP
VTASRQSFAQTNIESDGELPALHVGQRVEHPVFGEGIILNAEGEGARARVQVSFDGEGVK
WLVLGFAKLTPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatactcgatcagctcaaccccgcccagcgagaggccgtcagt
gccccccagggcaacctactggtactggcgggcgcgggctccggtaaaacccgcgtgctg
gttcaccgcattgcttggctgatgcaggccgaggggctgtcgccttacgcgctgctggcg
gtcacgtttaccaataaagcggcgcgcgaaatgcgcacgcgcttagaggcgctactgggt
atttccatgcgccacgtgtgggtcggcaccttccactccattgcccaccggctgctgcgt
acccactggcaagatgcccgcctgccgcaacacttccaaatcatcgattccgatgatcag
ctccggctgatcaaacgactgctcaaagattactcgatcgacgacgagcgcttcccgccc
cgccaggtgcaggggttcattgcgggctgcaaagaggaagggctgcggccccaccaagtc
aacgtcaacggtgatggctatttggcacaaatggtcgagctctacgagcgctaccagttc
acctgcgaacgcggcgggctggtggattttggcgagctgctgctgcgcagcctggagctt
ttgcgcgacaacccgccgctgctgaaccactatcgcgagcgtttcggccatgtgctggtg
gacgagttccaagacaccaataccctgcagtacgcgtggctgaaactgctgaccggccag
caaacgccgatgacggcggtgggcgatgatgaccagtcgatttacggctggcggggcgcc
aaagtggaaaacattcgccgcttcgaagaggagtttcccgatacccacacggtgcgtctg
gagcagaactatcgttcgaccagcgcgattttggacgctgccaacgcgctgatcagccat
aacagcgagcggttgggcaaaaacctctggaccgatggtatcgagggcgaaccgatctcg
gtgtatgccgggttcaacgacctggaagaagcccgctacatcgtcgacaccatcaaagag
aaaatcgaggagggcttcaaccgtcgtgatgtggccattctataccgctccaacgctcag
tcacggctgctggaagagacgctgattcgccaagggatgccctaccgcatctacggcggc
caccgcttttacgagcggctggagatcaagaacgccctggcctacctgcgcctgctgctc
aatcgtgacgacgatgcctccctcgaacgcgtcatcaacgtccccacccgaggcatcggc
acccgcacggtggaaatcgttcgccaccgcgcccgcgagcagagtgtctcgctctggcag
gcgctccacgacgcgattcaggatggcaccttgaaaggccgcgcgggcaacgccgttcaa
gccttcgccaacctgatcgagcagctcgataacgacgccgccgggctaccgctacatgaa
atcatcgaccatgtcactgcccataccgggttgatcgaacaccatcaaagtgagcgtggt
gaaaagggccaggcccgtgtcgaaaacctggaagagctggtcaccgccgcccgcgccttc
acccatggcgacgccttcgaaaccccggaagcgggcgaaggcatggcagcactggaagcc
ttcttatcagaagccgccctcaacgcgggggaccacgaagccgaagagttcgaagacagc
gtgcaactgatgacgctgcactcggccaaaggcctggagtttcccgtggtgttcatcgcg
ggcgtggaagaggggctgtttccccacaagatgtccgtggaagagcctgggcggctcgaa
gaggagcgcaggctttgctacgtgggcgtcacacgcgccatgcagaagctctacctcacc
cacgcggaaacccgccgactgcacggtaaagaagtgtttccacgcccgtcgcgcttcttg
cgtgagctgccgcctcatctgctggaggaggtccgcctgcgaggccatgtatctcgcccg
gtgaccgcctcgcggcaaagttttgcccaaaccaatatcgagagcgacggcgagctacct
gcgctgcacgtcggccagcgagtcgagcacccggtcttcggcgagggcatcattctcaac
gccgagggagaaggcgcccgtgcgcgggtgcaggtgagcttcgatggcgaaggcgtgaag
tggctcgtgctcggttttgccaaactgacaccgctttga
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