Halomonas sp. A020: HaloA020_11880
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Entry
HaloA020_11880 CDS
T10931
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
haaz Halomonas sp. A020
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haaz03032
]
HaloA020_11880 (gyrB)
03400 DNA repair and recombination proteins [BR:
haaz03400
]
HaloA020_11880 (gyrB)
Enzymes [BR:
haaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HaloA020_11880 (gyrB)
DNA replication proteins [BR:
haaz03032
]
Prokaryotic type
DNA Topoisomerases
HaloA020_11880 (gyrB)
DNA repair and recombination proteins [BR:
haaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HaloA020_11880 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BCB60487
LinkDB
All DBs
Position
1289139..1291559
Genome browser
AA seq
806 aa
AA seq
DB search
MSEQAYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFELVDNSIDEALAGHCSEI
RVVIHPDESVTVSDNGRGIPTELHEGEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEELRLTIWRQGEVFEQIYHHGVPQAPLGVVGKTEKSGTRVHFRPSPATFANI
EFHYDILAKRLRELSFLNSGVAIRLMDERSGKEELFHYEGGLKAFVDHLNKNKTVLNPVF
HFNAGRDDGVEVEVAMQWSDAFTENIFCYTNNIPQRDGGTHLAGFRAALTRTLNHYIEAE
GLLKKAKVNTSGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGRLFADY
LIEKPNEAKAIVNKMLDAARAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPSQSEL
YLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGR
EEFNPDKLRYHSVIIMTDADVDGSHIRTLLLTFFFRQMPELIERGHIFIAQPPLYKIKRG
KQELYLKDEQAMIDYLTTTALDGAGLHVNADAPGITGSQLEALVNQYRNVMKRIDRLARV
YPIEVLKQAVNATALQGETSLKDRVTMENWIAELQKAMDDRVAYEGGPRYQFYLQEDTER
GLHLPAVSLIAHGVTTEYVWGLDFFESADYRAMAGLGDTLNGLLDEGAYIARGERQKPVG
HFSEVLTWLMQEGQRGLSVQRYKGLGEMNPDQLWETTMDPDSRRMLRVTIEDAVAADMMF
NTLMGDEVEPRRDFIETNALVANLDI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaggcttacgattcatcaagcatcaaggtgctcaaagggctagacgcagta
cgtaagcgtccaggcatgtatatcggtgacaccgacgacggcaccgggctgcaccacatg
gttttcgagctggtggataactccatcgatgaagctctggccggccactgtagcgaaatt
cgtgtggtgatccacccggatgaatcggtaaccgtaagcgataatggtcgagggattccg
accgagctacacgagggcgagggtgtctctgcggcggaagtcatcatgacggtgctccac
gcgggtggcaagttcgacgataactcttataaagtatcgggcggcttgcacggtgtgggt
gtatcggtggtgaacgcactctccgaagagctgcgcctgacgatttggcgccaaggggag
gtgtttgagcaaatttatcaccatggcgtgccgcaagcgccgctaggcgtcgtaggcaaa
acggaaaaaagcggtacccgcgtgcattttcgcccgtctccggcgacgtttgccaacatc
gaattccactacgatattctggcgaaacgcctgcgtgagctctccttcctcaactcgggt
gtagccattcgcctgatggatgagcgtagcggcaaagaggagctgttccattacgaaggt
ggtctgaaagccttcgttgaccacttgaacaaaaacaaaaccgttctgaacccggtattc
cacttcaacgctgggcgtgatgatggcgtggaagtcgaagtggccatgcagtggagcgat
gccttcacagagaacatcttctgttacaccaacaacattcctcagcgggatggcggtacc
cacttggcagggttccgcgctgcgctaacgcgtacgctaaaccactatatcgaagcggaa
ggcctgctgaaaaaagccaaagtgaacacgtcgggcgacgacgcccgtgaaggcctgacg
gcgatcatatccgtcaaagtgcccgatccgaagttctcatcgcaaaccaaggacaagctc
gtctcgtccgaggtgaagacggcggtggagcaggagatgggtcgcttgtttgccgactac
ctgatcgaaaaacctaacgaagccaaagccatcgtcaacaagatgctggacgcggcacgt
gcccgcgaggcggcgcgaaaagctagagacatgacccgccgcaaaggcgctctggatatc
gcgggtttgccgggcaaactagccgattgccaggagaaagacccgagccagtcggagctt
tacctggtggagggtgactcggcgggggggagtgccaaacaggggcgtgatcgtcgtacc
caggccattctgccgttgaaaggtaaaatcctgaacgtcgaaaaagcgcggttcgataag
atgctctcttccgctgaagtagggacgctgattacggcgctggggtgcggcattggacgc
gaagagttcaaccctgacaagctgcgctaccactcggtcatcatcatgaccgacgccgat
gtcgatggttcccacattcgcacgctgctgctgacgttcttcttccgtcagatgcccgag
cttatcgaacgtggccacatttttatcgcgcagccgccgctttacaaaatcaagcgcggt
aagcaagagctctatctgaaagatgagcaggcgatgatcgattacctgaccaccaccgca
ctggatggagcagggctgcacgtcaatgcagacgcgcctggcattaccgggtcgcagttg
gaagcactggtcaatcagtaccgcaacgtgatgaaacgtatcgatcgcttggcacgggtg
taccccatcgaagtgctcaagcaagccgtcaatgcgacagcgttgcagggtgagaccagc
ttgaaagatcgcgtcaccatggagaactggatcgccgagctgcaaaaagccatggacgac
agggtggcttatgagggcggcccgcgctatcagttctacctgcaagaagacaccgagcgt
ggcctgcatctaccggcggtatcgctgattgcccacggcgtcaccacggaatacgtgtgg
ggcctggacttcttcgaaagcgccgattaccgcgccatggcagggttaggggacaccctc
aacggcttgctggacgaaggcgcctacatcgcccgtggtgagcgccagaagcccgttgga
cacttctctgaagtgctgacgtggctgatgcaggaaggccagcgtggtctctctgtgcag
cgctataaagggctaggtgagatgaacccggaccagctatgggaaaccaccatggacccg
gatagccgtcgtatgttgcgggttaccatcgaagatgcggtagcagcagatatgatgttc
aacacccttatgggtgacgaagtggagccgcgtcgcgactttatcgagaccaacgcgctc
gttgctaacctcgacatctaa
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