Halomonas sp. A020: HaloA020_13880
Help
Entry
HaloA020_13880 CDS
T10931
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
haaz Halomonas sp. A020
Pathway
haaz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HaloA020_13880 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haaz03021
]
HaloA020_13880 (rpoA)
03400 DNA repair and recombination proteins [BR:
haaz03400
]
HaloA020_13880 (rpoA)
Enzymes [BR:
haaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HaloA020_13880 (rpoA)
Transcription machinery [BR:
haaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HaloA020_13880 (rpoA)
DNA repair and recombination proteins [BR:
haaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HaloA020_13880 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
BCB60687
LinkDB
All DBs
Position
1508210..1509205
Genome browser
AA seq
331 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGAAVVEAE
IAGVEHEYSALEGVQEDVIEILLNLKDVAIKMHSRDEAVLSLNKQGPAVVTAGDIALDHS
VEIVNPDHVIAHVNEGAELKIQLKVALGRGYEPADARGSDEETRAIGRLQLDATFSPVRR
VSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEV
EEEEDHVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNE
IKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttcttcgtcctcgcgacatcaaggtcgaagaaatcagc
gcacatcatgccaaaatcgtcctcgaaccgttcgagcgcggctttggtcacaccctgggg
aatgcacttcgtcgcattctgctttcatccatgcccggcgccgctgtggtagaggctgaa
attgccggtgtagagcacgaatacagtgcgctcgaaggggtgcaggaagatgtcatcgaa
atcctcctgaacttgaaagatgttgcgatcaagatgcacagccgcgatgaggcggtgctc
tcgctgaacaagcagggcccagccgtcgtcaccgctggcgacattgcgcttgatcatagc
gtcgaaatcgtcaacccggaccatgtcattgcacacgtcaatgaaggtgccgagctgaaa
attcagcttaaggtcgcgctgggtcgtggttacgaaccggctgacgctcgtggctctgat
gaagagacccgtgcgattggacgcctgcagctggatgccaccttcagccctgttcgccgt
gtttcctactcggtcgaagccgctcgtgtcgagcagcgtaccgacctcgataagctgatt
atcgacctggaaaccgacggtaccctggatccggaagaggctatccgtcgcagtgcgacc
attctgcaagagcagctggccgccttcgtcgacctggaagctgataaagagcaggaagtc
gaagaggaagaggatcacgtcgatccgatcctattgcgccccgtagacgatctcgagttg
accgtacgcagcgctaactgcctcaaagccgagaatatctactacatcggtgatctgatt
cagcgcacggaagtggagctgctgaagactccgaacctcggtaagaagtccttgaatgaa
atcaaggatgtattggcagcgcgcggcttgtccctcggcatgcggctggaaaattggcca
cccgctagcctgaaggacgacaaggcttccgcgtaa
DBGET
integrated database retrieval system
