Halomonas sp. A020: HaloA020_14410
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Entry
HaloA020_14410 CDS
T10931
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
haaz Halomonas sp. A020
Pathway
haaz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HaloA020_14410
09124 Replication and repair
03420 Nucleotide excision repair
HaloA020_14410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haaz03021
]
HaloA020_14410
03036 Chromosome and associated proteins [BR:
haaz03036
]
HaloA020_14410
03400 DNA repair and recombination proteins [BR:
haaz03400
]
HaloA020_14410
Enzymes [BR:
haaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HaloA020_14410
Transcription machinery [BR:
haaz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HaloA020_14410
Chromosome and associated proteins [BR:
haaz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HaloA020_14410
DNA repair and recombination proteins [BR:
haaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HaloA020_14410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCB60740
LinkDB
All DBs
Position
1558690..1560951
Genome browser
AA seq
753 aa
AA seq
DB search
MSRYRVAVRTLCDFTAREGDLDHRFTPSPSAQAGIEGHALVAKRRENIAGYEAELPLSGE
YQGLHVSGRADGFDVAANCVEEVKTHRGSLTRMADNQRSLHWAQVKMYGALLCAERDLPH
ITLALVYLNIDSGQETRLTLEASNEELTAFFVDQCQRFLTWAEQEAAHRERRDGWLTTLT
FPHADFRPGQRALAEDVFKAASTGRCLLAQAPTGIGKTLGTLFPMLSAMPRQRLDRIAFL
TMKTPGRRLALDALASLDAPTQALRVLELVAREKACEYPGTACQGDTCPLARGFYDRLSA
ARQVAVEKSWLDREALREVALAHHVCPYYLGQELARWADVVVGDVNHWFDSHALLHGLAQ
ANDWRVGLLVDEAHNLVERARGMYSAALTQQRLSYLRRQSSPALAKPLARVGRQWQALNK
ETAEHAPERRYHVLEALPTKLVGALHALAGAITDYLVEHPDEVNQALQELLFEALAFCRL
AESFGDHSLCDLEIQGKGRAVLGLRNVIPADFLAPRFERAHCAVLFSATLTPFHYYRNLL
GLPEQSVWREVDSPFVACQLEVQLRTDISTRYHHRVASVTPIVATLAAQYRRTPGHYLAF
FSSFAYLEQVMRAFELAHPEIPAWAQTRSMQEPERDAFLARFASGGKGIGFAVLGGAFAE
GIDLPGDRLIGAFVATLGLPPFNDFNEALKARLQARFGQGDDYTYHIPGMIKVVQAAGRV
IRSPEDEGVVVLMDDRFAQNKVRALLPRWWQLS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctatcgggtggcggtgcgcacgctgtgcgacttcaccgcgcgcgaaggtgat
ctcgaccaccgcttcactccctcgcccagcgcccaagcgggtatcgaggggcacgctctg
gtggccaaacggcgggaaaacatagcgggttacgaggccgaacttcctctctccggtgag
tatcaggggctacacgtgtctggccgcgccgatggtttcgatgtggcggccaactgtgtc
gaagaggtcaagacccatcgcggtagcctaacgcgcatggccgataaccagcggtcgctc
cactgggcgcaggtaaagatgtacggggcgctgctttgcgcggagcgggatttgccgcac
attacgttggcgctggtatacctgaatatcgacagtggccaggaaacgcggctgacgctc
gaggctagcaacgaggaattaacagcgttttttgtcgaccagtgccaacgctttttaacc
tgggccgagcaggaggccgcccaccgcgagcgtcgcgatgggtggctcaccacgctgacc
tttcctcacgcggattttcgccccggccagcgggcactggccgaggatgtcttcaaagcc
gccagcaccgggcgctgcctgctggcccaggcgcccactggtatcggcaaaaccctgggc
acgctgttccctatgctctccgcgatgccccgtcagcggctcgaccgcatcgcctttctc
accatgaaaaccccaggccgccgcttggcgttggatgctttggcgagcttggatgctccc
acgcaggcgctgcgtgtgctggaactggtagcccgtgaaaaagcgtgtgagtacccgggt
accgcctgccagggcgatacctgcccgttggccagggggttttacgatcgcttgtctgcc
gctcgccaagtcgcggtagagaaaagctggctagaccgcgaagcactgcgcgaggtagcg
ctggcacatcacgtctgcccctactatttgggccaggagctggcccgctgggccgatgtg
gtcgtgggggatgtcaatcactggttcgatagccatgcgcttctgcacgggcttgcccag
gccaacgactggcgggtgggcctactggtggatgaggcgcataacctggtagagcgcgct
cgtggcatgtacagcgccgccctcacccagcagcgcttgagctatctgcgccgccaatcc
tcacccgccttagccaagccgttggcccgagtgggcaggcagtggcaggcgctcaacaaa
gagacggccgagcacgcaccagagcgccgctaccatgtgttggaggcactgcccaccaag
ctggtgggggcgctgcatgccctggccggggccatcacggactatctcgtggagcatccc
gacgaagtgaatcaggcgcttcaggaactgctgttcgaagcactggcgttctgtcgctta
gcggaatcgttcggcgaccactcgctgtgcgatttggagattcaaggtaagggacgtgcg
gtgcttgggctgcgcaatgtgataccggcggattttcttgccccccgttttgagcgtgcc
cactgtgcggtgctgttttcggccacgctgacgccttttcactactaccggaacctgctg
ggtcttcccgaacagagtgtttggcgtgaggtagactcgccgttcgtggcgtgccaacta
gaggtgcagttacgcaccgacatttccacgcgctatcaccatcgtgtggcgtcggtaacg
ccgatcgtggctaccctggcagcgcagtaccggcgcacgccgggccactatttggctttt
tttagcagttttgcatacctagaacaggtgatgcgtgcgttcgagttggcgcaccctgag
attccggcttgggcgcaaacacgcagtatgcaggaacccgagcgtgatgcgtttctagct
cgctttgcatcgggtgggaaagggattggctttgccgtattgggcggcgcctttgcggag
ggaatcgatttgcccggtgaccgattgattggtgcctttgtggcgacgctcggcttaccc
cccttcaacgacttcaacgaagcgctcaaggcacggctgcaggcgcggttcggtcaaggt
gatgactatacctatcatatccccggtatgatcaaagtggtgcaagccgccgggcgcgtg
atccgcagccctgaagatgagggggttgtggtgttaatggatgatcgcttcgctcagaac
aaagtgcgcgccttactgccgcgttggtggcagttaagctga
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integrated database retrieval system
