Halomonas sp. A020: HaloA020_15230
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Entry
HaloA020_15230 CDS
T10931
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haaz Halomonas sp. A020
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haaz03016
]
HaloA020_15230 (truB)
Enzymes [BR:
haaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HaloA020_15230 (truB)
Transfer RNA biogenesis [BR:
haaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HaloA020_15230 (truB)
Prokaryotic type
HaloA020_15230 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BCB60822
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All DBs
Position
1642724..1643644
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AA seq
306 aa
AA seq
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MARRRRGLPVNGVVLLDKPKGLSSNHALQRVRRLFEAQKAGHTGTLDPMATGLLPICLGE
ATKFSAHLLEADKMYRTRVELGVITDTGDAEGNVIERREVPSLTGEEVEAVLVRFRGEIE
QVPPMYSALKHQGKKLYELAREGKQVERAARRVSVYDARLLAFEGTAFELEVSCSKGTYI
RTLAEDIGHALGCGAHISQLRRLKTGPFDGDAMWTLEALEALASQADREAELMPVDVLVD
HLPSLNVDDTSFGRLAHGQSAELTVDELAPDALARLYHAETFIGLGVVKGPQEVAPRRLL
STVARS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcgccgtcgcggattaccggtcaatggcgtggtgctgctggataagccgaaa
ggcctctccagcaaccacgcgttgcagcgcgtgcgtcgtctgttcgaggcgcaaaaagcc
ggacataccggcacgctggaccccatggcaacagggcttctgcctatctgcctgggggag
gccaccaagttttccgcgcacctactggaagccgacaagatgtatcgcacccgggtagag
ttgggggtgatcaccgacaccggcgatgccgagggtaacgtcatcgagcggcgtgaggtg
ccaagcctcaccggcgaggaggtggaggccgtgctggtccgctttcgtggcgagatcgaa
caggtaccgcccatgtattcggcgttgaagcaccagggcaaaaagctctacgagctggcg
cgtgagggcaagcaggttgaacgtgcagcgcggcgggttagcgtgtatgatgcgcgcctg
ctggcgttcgagggcacggcgttcgagctggaagtcagctgtagcaaaggcacgtatatc
cgtaccttggccgaagacatcggtcacgccctgggctgtggtgcccacatcagtcagcta
cggcggctcaaaaccggaccgttcgatggcgacgcgatgtggacactcgaggcgttggaa
gcactggctagccaagccgaccgcgaagccgaactcatgcccgtggatgtgctggtcgat
catctgccatcgctgaacgtcgatgacacctcgtttggccgactggcccacggacagtca
gccgagctcaccgtcgatgaattggcacccgatgcgttggcacgactttatcacgccgag
acgtttatcggccttggcgttgtaaaagggccgcaggaagtggcccccaggcggctgtta
agcacggtcgctcgttcgtaa
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