Halomonas sp. A020: HaloA020_16050
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Entry
HaloA020_16050 CDS
T10931
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
haaz Halomonas sp. A020
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haaz03021
]
HaloA020_16050 (rpoH)
Transcription machinery [BR:
haaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HaloA020_16050 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
UCR_14kD
SWC7
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BCB60904
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All DBs
Position
1729184..1730053
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AA seq
289 aa
AA seq
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MSTSLLPVGQLSPGNDLGGYIQAVNGIAVLSVEEERELAFRLYDEGDLEAARRLVLSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPNQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKIATTKAQRKLFFNLRSAKKRLAWLNNDEVDAIAKDLDVKPEVVRDMEGRLSAFD
AGYDASPSDDEESTYQAPAYFLDDASADPATQLEDSDFEEDATRRLQLALKALDERSRDI
LQRRWLTDDKATLHDLADVYGVSAERIRQLEKNAMKKLRQKMGDAAIAA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagtcttctaccggtgggacagctttcaccaggcaatgacctgggtggctac
attcaagcggtgaatggcatcgcggtgctgagcgtcgaagaggagcgcgagctggcgttc
cgtctttacgatgagggcgatctagaggcagcacgtcgattggtgctatcgcaccttcgt
ttcgtggtgcacattgctcgcagctactccggttacggtctgccgcaagcggacttgatt
caggaaggcaacgtcggtttgatgaaagccgtcaagcgcttcgatcccaatcaaggggta
cgcttggtgtcgtttgccgtgcactggatcaaagccgaaattcatgagttcgtgctgcgt
aactggcgtatcgtcaaaatcgccaccaccaaggcgcagcgtaagctgtttttcaatctg
cgtagcgcgaaaaagcgtttggcatggctgaacaacgacgaggtcgacgcaattgccaaa
gatctcgacgtgaaaccggaagtcgtgcgcgatatggaagggcgcctctcggcattcgac
gcagggtacgacgcatcgcccagtgacgacgaagagagtacgtatcaagcgccagcgtac
ttcctcgatgacgcttccgctgacccggcgacacagctcgaagacagcgacttcgaggaa
gacgccacgcgccgtcttcaactggcactcaaagcgttggacgagcgctcgcgggacatt
ttgcagcgccgctggctcaccgatgacaaagccacgttgcacgatttggccgacgtgtat
ggcgttagcgctgagcgcattcgccagctcgaaaagaacgccatgaagaagctacgtcag
aaaatgggcgacgcggccatcgctgcgtaa
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