Halomonas sp. A020: HaloA020_23300
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Entry
HaloA020_23300 CDS
T10931
Symbol
dgcB
Name
(GenBank) dimethylglycine catabolism protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
haaz Halomonas sp. A020
Pathway
haaz00260
Glycine, serine and threonine metabolism
haaz01100
Metabolic pathways
Module
haaz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
haaz00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HaloA020_23300 (dgcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_9
Fer4_17
Fer4_7
Fer4_10
Fer4_6
Fer4_2
Fer4
Fer4_16
Fer4_4
Fer4_18
Fer4_21
LdpA_Fe-S-bd
Fer4_22
DUF2852
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
BCB61629
LinkDB
All DBs
Position
2508305..2510308
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AA seq
667 aa
AA seq
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MLDTLLPILIFSALALAVIGAVRRVRLWRQGRPAKVDLLKGLIAMPRRYLVDLHHVVGRD
KMISNTHVATAGGFVAAAVLMILVHGLGVANPVLGGLLLLASTSMFIGSLFVARRRLDPP
TRLSKGPWMRLPKSLMAFSLGVFLITLPTVALLPEGLLESSGGWLLALVLAGVIAWGLGE
MFFGMTWGGPMKHAFAGALHLAFHRRAERFSTHKGGNGRSTGLKALNLDDAKAPLGVEKP
VDFTWNQLLGFDACVQCGRCEAVCPAFAAGQPLNPKKLIQDMVVGMAGGSDAGYVGSPYP
GKPVGEHAGAPHSPIVALEGKALVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLT
LERGKTPNKGAEVLDNLIATDNPGGFDPGSRLHWAADLNLPLMADLKQVDVLLWLGDGAF
DMRNQRTLRALVKVLRAAEVDFAVLGAEERDSGDVARRLGDEATFQSLAKRNIATLSKYH
FLQIVTCDPHSFHVLGNEYGELGGHYHVRHHSTFIAELYEAGRLAFAPWKGGRVTYHDPC
YLGRYNGEYDAPRNVLKALGIELKEMQRSGFRSRCCGGGGGAPITDISGKQRIPDMRMND
VKESGAELVAVGCPQCTAMLEGVVDATAEVRDIAELVADALVERPTDPALEAARRSATTT
PAEEVTV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacacgctcttgccgatactgatttttagcgctttggccctggccgtcatcggc
gccgtgcgccgcgtgcgtctctggcgccagggacgcccggcgaaggtcgatctgctcaag
ggtctgatcgcaatgccgcgccgctacttggtggatctgcaccatgtggtggggcgtgac
aagatgatctccaacacccacgtggccaccgccggtggcttcgtggccgctgccgtgcta
atgatcctggtgcacggtcttggggtcgccaaccccgtgctgggcggattactgctcctg
gccagcacctcgatgttcatcggcagcctcttcgtggcgcgtcggcggctcgatccaccc
acgcggctctccaaggggccctggatgcgcctgccaaaaagcctcatggcattttcgctg
ggcgttttcctgatcactctgcccacggtggccctactgcccgaagggctgctggaaagc
agtggcggctggctgttggcgctggtgctggcgggcgtcatcgcctgggggctgggtgag
atgttcttcggcatgacctggggcgggccgatgaagcacgcgtttgcgggagccttgcac
ctggctttccaccgccgtgccgaacgcttctcgacgcacaagggtggcaacggccgctcg
acgggcctcaaagcgctgaatctcgacgatgccaaggcgccgctgggtgtggaaaagccc
gtcgactttacctggaatcagctgctgggcttcgacgcctgcgtccagtgcggccgctgt
gaagcggtatgtccggcgtttgccgcgggccagccgctcaaccccaagaaattgattcag
gacatggtggtgggcatggccgggggcagcgacgcgggctatgtcggttctccctacccg
ggaaaacccgtgggtgaacatgcgggtgcgccccattcgcccatcgtggcgctggagggc
aaggcgctcgtcgatgccgagaccctatggtcctgcaccacctgtcgcgcctgtgtcgaa
gagtgcccgatgatgatcgagcacgtcgatgccatcgtcgatatgcgccgccacctgacg
ctggagcggggcaagacgcccaacaaaggcgccgaggtgctcgacaatctgattgccacc
gacaaccccggcggtttcgatccaggctcgcggctgcactgggcggcggatctcaacttg
ccgctgatggccgatctcaagcaggtcgacgtgctgctgtggctgggggatggcgccttc
gacatgcgcaatcagcgtaccctgcgtgcgctggtgaaagtgctgcgtgccgccgaggtg
gacttcgctgtactgggtgctgaagagcgcgacagcggcgatgtagcgcgtcgtctgggt
gacgaggccacgttccagtcactcgccaagcgcaacattgccacgctgtccaagtaccac
ttcctgcagatcgtcacctgcgacccgcacagcttccacgtgctgggcaacgagtacggt
gagctgggcggccactatcatgttcgccaccacagtacgttcattgctgagctatatgag
gccggacggttggcgttcgcgccctggaagggcggccgcgtcacttatcacgacccctgc
tacctggggcgctacaacggtgaatacgacgccccgcgcaacgtgctcaaggcactgggt
atcgagctcaaggagatgcagcgctccggcttccgctcgcgctgctgcggcggcggtggc
ggcgcgccgattaccgatatttccggcaagcagcgtattcccgacatgcgcatgaacgac
gtcaaagagagcggtgccgagctggtggcggtgggctgcccgcagtgtaccgccatgttg
gaaggcgtggtggatgccactgccgaggtgcgtgacattgccgaactggtggcggatgcg
ctggtcgagcgccctactgaccctgcgctcgaggcggcccgtcgctctgctaccaccacg
cccgccgaggaggtgaccgtatga
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